Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04869 ATGTGGGATCAGGAAGGATTGAATTCAGGCAAAGATTTATCTATGGGAGAAGCACCGACACTCTTTCCTAAACACCTGCAGAATGGAACTAGTAATGGCTTTGAATTAAAAAACAGAACATTGGAAACAGCTACTACCATTGGTGATAAAAAGTATGTCATTGGTGGAGCTGATGGTGAAACTTTGTCCATGAAAGTTCAAATTTTTGACAACTGTCTTGGAGAATGGGTTAATCCCACTGTGCTAGGCAACAAACCCATGTCATGTGAAGGCCACTCAGCAGTGCTTTTGAAAGACCGTATACTAATTCTTAAGAAAAAATCTAAGCCAGATGATCATACATGGTTTCTAGAGGTAGACACCCAATATGTCAGGCAGCAGAAAAAAGTTTTGGGGACTGAGGTTGTTGCATGGAGTAAGGGTGTGGTAGGAAATGCTGAGAAACCTGTTGTTATTAGTGGTCCTTCTGGAGTAGGTAAAGGAACATTGATATCTATGCTCATGAAGGAATTTCCATCTATGTTTGGTTTCTCTGTGAGCCACACAACTCGTGCACCAAGAGGTATGGAGAAAGATGGGGTCCATTACCATTTTACAGAGAAGAGTGTTATGGAAAAAGAGATTAAAGATGGAAAGTTTCTTGAGTTTGCTTCTGTGCATGGTAACTTATATGGGACCAGTGTTGAAGATGTTGAACTGGTATCAGATGCAGGGAAAAGATGTATTCTTGATATTGATGTTCAAGGGGCAAGATCTGTGAGGGCAAGTTCTCTTGAAGCCATATTCATCTTTATCTGCCCCCCATCAATGGAAGAGTTGGAGAAGCGTCTTCGTGACAGAGGGACAGAGACAGAAGAACAGGTCCTAAAGCGATTACGAAATGCTCAAGCTGAGATAGAACAAGGGAAATCTTCAGGCATATTTGATTTCATCTTATACAATGACAAACTTGAGGAGTGTTATGAGAGTCTAAAGAAATTATTGGGACTTGATGGTTGTGTCACTCCTCCAGCCAAGTCTGTTGCAAGAGAGATCAATCTCCCAATGGATCATTCAGTGTCAAAAATTGATGACAAAATCATCATAAACTGCATCTCTTCAGGACAAGAAAAGGAATCAAAGAACTTGATCATGTTAGATGTGTCCTCACTTAAAGGGGGTGCACCTGGACGGACAAGAGGGCTAGATTTTCAAGCCATTGACTCATTTTCAGATGGCTTCAAAGGCATGGATCAATTTGAAATTCATTGA 1251 0.4061 MWDQEGLNSGKDLSMGEAPTLFPKHLQNGTSNGFELKNRTLETATTIGDKKYVIGGADGETLSMKVQIFDNCLGEWVNPTVLGNKPMSCEGHSAVLLKDRILILKKKSKPDDHTWFLEVDTQYVRQQKKVLGTEVVAWSKGVVGNAEKPVVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRGMEKDGVHYHFTEKSVMEKEIKDGKFLEFASVHGNLYGTSVEDVELVSDAGKRCILDIDVQGARSVRASSLEAIFIFICPPSMEELEKRLRDRGTETEEQVLKRLRNAQAEIEQGKSSGIFDFILYNDKLEECYESLKKLLGLDGCVTPPAKSVAREINLPMDHSVSKIDDKIIINCISSGQEKESKNLIMLDVSSLKGGAPGRTRGLDFQAIDSFSDGFKGMDQFEIH. 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04869 416 CDD GMPK 149 325 - -
Seca8g04869 416 Gene3D - 26 133 IPR015915 GO:0005515
Seca8g04869 416 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 328 IPR027417 -
Seca8g04869 416 SUPERFAMILY Kelch motif 42 104 IPR015915 GO:0005515
Seca8g04869 416 Coils Coil 415 416 - -
Seca8g04869 416 ProSitePatterns Guanylate kinase-like signature. 182 199 IPR020590 -
Seca8g04869 416 FunFam Guanylate kinase 2 140 332 - -
Seca8g04869 416 SMART gk_7 146 332 IPR008145 -
Seca8g04869 416 MobiDBLite consensus disorder prediction 1 24 - -
Seca8g04869 416 NCBIfam guanylate kinase 148 328 IPR017665 GO:0004385|GO:0006163
Seca8g04869 416 ProSiteProfiles Guanylate kinase-like domain profile. 147 329 IPR008144 -
Seca8g04869 416 PANTHER GUANYLATE KINASE-RELATED 43 394 - -
Seca8g04869 416 Gene3D - 143 330 IPR027417 -
Seca8g04869 416 Pfam Guanylate kinase 147 328 IPR008145 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04869 Seca-Chr8 135059426 135062317 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04869 K00942 - gmx:100812658 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04869 8 135059426 135062317 Seca8g04869 8 135059426 135062317 ECH
Seca8g04869 8 135059426 135062317 Seca8g04869 8 135059426 135062317 PCT