Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04862 ATGGAGTTTGGTTTGGTTTGGTTTAGAGAAAACATACATGTAAGGAAGAACCGAAACGATCTTTTTCCTTTTGGTGTGTGGTTTGGTTTTGTAGGAGATCCTGCTGTTGAGACCTATCAAGGCCTTCACTTGGTCTATATGCATGCTGGGACCAACCCTTGTGAAGTAATTAACCAAGCTGTCAAGGCTGTAGAAAAACATATGCAGACTTTCCTTCACCGTGAGAAGAAAAGATTGCCATCTTTTCTTGACTGGTTTGGCTGGTGTACCTGGGATGCTTTCTATACTGATGTCACAGCAGAGGGTGTTGAGGAAGGCCTGAAGAGCCTATCAGAAGGAGGTACTTCTCCACGATTCCTCATCATAGATGATGGTTGGCAACAGATTGAAAGTAAACCAAAGGATTCTGATTCTGTTGTACAAGAAGGAGCACAGTTTGCTAATAGGTTGACTGGTATTAAAGAGAACACTAAATTTCGAAAGAATGGACAGAACAACAATACAACCTCAGGTTTGAAGCATGTTGTAGATGAAGCCAAGCAACGTCATAATGTGAAATATGTTTATGTTTGGCATGCTCTAGCTGGTTATTGGGGTGGAGTGAAGCCAGCAGCAAGTGGCATGGAACATTATGACACTTCATTAGCATACCCAGTACATTCTCCAGGTGTCTTAGGAAACCAACCAGACATTGTCATGGACAGCTTGGCTGTACATGGCTTAGGTTTGGTGCACCCAAAGAAGGTTTTTGATTTCTATAATGAGCTCCATGCTTACTTAGCTTCATGTGGAGTAGATGGAGTGAAGGTTGATGTGCAAAACATTATTGAGACCCTTGGTACTGGCCATGGTGGCAGAGTCTCGCTCACACGGAGCTATCATCAAGCACTTGAGGCATCTGTTGCTCGTAATTTTCCTGATAATGGATGCATTGCCTGCATGTGTCACAATACTGATGGCCTTTATAGTGCCAAACAGACTGCTGTTGTGAGAGCTTCTGATGATTTTTACCCACATGATCCTGCTTCCCATACCATCCATATTTCATCTGTAGCATATAACTCACTTTTCCTTGGAGAATTCATGCAACCTGACTGGGACATGTTTCATAGTTTACATCCAGCGGCAGAGTATCATGCTGCAGCTCGTGCAATAAGTGGAGGTCCAATTTATGTTAGTGATAAGCCAGGAAGACACAATTTTGATCTTCTTAAGAAATTGGTTCTGCCTGATGGTTCAGTTCTCCGTGCTCAGTTACCTGGCAGGCCTACTATTGATTCTCTTTTTGTTGATCCAGCAAGAGATGGGACTAGCTTGCTTAAGATATGGAACTTAAACAAATGCTCTGGGGTGGTTGGTATATTCAACTGCCAAGGTGCTGGATGGTGTAAGATAGAGAAGAGAACCCGTATTCATTGTCCTTCCCCTGGGACACTCACTGGCTCTGTTTGTACCTCTGATGTTGACCTCATTGCCCAAGTAGCTGGTGCTGATTGGAATGGCGATGCTATTGTTTATGCCTATAGATCAGGTGAGGTAATTCGGCTACCGAAAGGTGCTTCGGTGCCAGTGACACTAAAAGTTCTAGAGTATGAACTTCTCCATTTCTGTCCAATTAAGGAAATTGCACCAAGTATTTCATTTGCACCAATAGGGCTATTGGATATGTTTAACACTGGAGGAGCTGTGGAACAGTTTGAAATCCATAAGGCATGTGATGGGGTGTTGTCATCAAATGTGACCACTTCTCTGAGAGTAAGGGGAAGTGGCAGATTTGGGGTTTACTCCTCTCAGAGACCAGTGAAGTGTGTGCTAGGTGACAATGAAACCGACTTCAATTATGACTCAGAGACAGGGTTAACAACTTTTTCTATCCCAGTGCCTGCAGAGGAGATGTATAGATGGCCAATAGAGATCCAATTTTGTGTCGTTAATTCTTAG 1941 0.4323 MEFGLVWFRENIHVRKNRNDLFPFGVWFGFVGDPAVETYQGLHLVYMHAGTNPCEVINQAVKAVEKHMQTFLHREKKRLPSFLDWFGWCTWDAFYTDVTAEGVEEGLKSLSEGGTSPRFLIIDDGWQQIESKPKDSDSVVQEGAQFANRLTGIKENTKFRKNGQNNNTTSGLKHVVDEAKQRHNVKYVYVWHALAGYWGGVKPAASGMEHYDTSLAYPVHSPGVLGNQPDIVMDSLAVHGLGLVHPKKVFDFYNELHAYLASCGVDGVKVDVQNIIETLGTGHGGRVSLTRSYHQALEASVARNFPDNGCIACMCHNTDGLYSAKQTAVVRASDDFYPHDPASHTIHISSVAYNSLFLGEFMQPDWDMFHSLHPAAEYHAAARAISGGPIYVSDKPGRHNFDLLKKLVLPDGSVLRAQLPGRPTIDSLFVDPARDGTSLLKIWNLNKCSGVVGIFNCQGAGWCKIEKRTRIHCPSPGTLTGSVCTSDVDLIAQVAGADWNGDAIVYAYRSGEVIRLPKGASVPVTLKVLEYELLHFCPIKEIAPSISFAPIGLLDMFNTGGAVEQFEIHKACDGVLSSNVTTSLRVRGSGRFGVYSSQRPVKCVLGDNETDFNYDSETGLTTFSIPVPAEEMYRWPIEIQFCVVNS. 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04862 646 Pfam Raffinose synthase or seed imbibition protein Sip1 32 624 IPR008811 -
Seca8g04862 646 SUPERFAMILY (Trans)glycosidases 82 412 IPR017853 -
Seca8g04862 646 Gene3D Aldolase class I 84 407 IPR013785 -
Seca8g04862 646 PANTHER - 32 639 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04862 Seca-Chr8 134930853 134934331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04862 32 640 Glycoside Hydrolase AT1G55740 58.632 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04862 K06617 - gmx:100807861 1070.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04862 8 134930853 134934331 Seca8g04862 8 134930853 134934331 ECH