Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04850 ATGGCTTCTTTAGTATCTTCCCCATTTACTCTATCTAAAGCTGACCAACTTTCTTCTCTTGCCCAAAGACACCTTTTTCTTCATTCTTTCCTTCCCAAGAAGAGCAGTTACTTTGGCAGCTCAAAATCTTCCCTGAGAGTGAAATGTGCTGCAATTGGCAATGGTTTGTTCACACAAACCACCCCAGAAGTGCGTAGGATAGTTCCAGAGAAGAACCGAAACCTGCCAACGGTTAAAATTGTGTATGTTGTCCTTGAAGCTCAGTACCAATCATCTCTCTCTGCTGCTGTGCGAGCTCTTAATAGTAACAACAAAGATGCTTCCTTTGAAGTTGTGGGTTACTTGGTGGAGGAGCTTCGTGATGAGTCCACGTACAAGACTTTCTGCAAGGATTTGGAAGATGCTAACATTTTCATTGGTTCTCTGATTTTTGTGGAGGAGCTTGCCCTCAGGGTTAAGGATGCTGTGGAGAAAGAAAGGGACAGGCTTGATGCAGTTTTGGTGTTCCCATCAATGCCTGAGGTAATGAGGTTGAACAAGTTGGGGTCTTTCAGCATGTCACAGCTTGGACAATCCAAGAGCCCCTTTTTCCAGCTGTTCAAGAAGAAGAAGCAGTCTTCTGCTGGGTTTGCTGATAGCATGTTGAAGCTTGTGAGGACCTTGCCAAAGGTTTTGAAGTATTTACCAAGTGATAAAGCTCAGGATGCTAGGTTGTATATTCTGAGTCTGCAGTTTTGGCTTGGTGGGTCACCTGATAATTTGCAAAATTTCGTGAAAATGATTTCTGGGTCTTATGTTCCAGCATTGAAAGGGACAAAGATGGAGTATTCAGAACCAGTTTTGTACTTGGATACTGGAATTTGGCACCCTCTAGCTCCTTGTATGTATGATGATGTGAAAGAGTATTTGAATTGGTATGGAACTAGAAGGGATGCTAATGAGAAGCTAAAGAGTCCAAATGCGCCAGTAATTGGTTTGGTTTTGCAGAGGAGTCATATTGTTACTGGAGATGATGGTCACTATGTGGCTGTGATCATGGAACTTGAAGCTAGAGGGGCTAAGGTTATTCCAATTTTTGCTGGTGGGCTTGACTTTTCAGGGCCAGTGGAGAGGTTCTTTATTGATCCAATTACTAAGAAACCATTTATAAATTCTGCGGTTTCACTCACTGGCTTTGCTCTTGTTGGAGGCCCTGCAAGGCAGGACCATCCAAGGGCAGTTGAAGCTTTGAGGAAGCTAGATGTTCCATACATTGTTGCATTACCACTGGTGTTCCAGACAACAGAAGAGTGGCTCAACAGTACTTTGGGTTTGCATCCAATTCAGGTTGCTCTTCAAGTTGCACTGCCAGAGCTAGATGGAGGCATGGAGCCAATAGTTTTTGCTGGTCGAGATCCCAAAACAGGAAAATCTCATGCTCTTCACAAGAGAGTGGAGCAGCTCTGCACCAGGGCAATCAAATGGGCTGAATTGAAAAGGAAATCAAAGGAAGAGAAAAAACTAGCAATCACTGTCTTCAGTTTCCCACCAGACAAAGGAAATGTAGGAACTGCTGCCTACCTGAACGTCTTCTCCTCCATTTTCTCTGTTCTTAAAGACCTTCAAAGAGATGGTTACAATGTTGAGGGTCTTCCTGAGACTTCAGAAGCTTTGATTGAAGAAGTTATACATGACAAAGAAGCGCAATTTAGCAGCCCAAATTTGAACATTGCTTACAAAATGAGTGTCCGTGAATACCAAAATCTCACTCCCTATGCCACAGCATTAGAAGAAAATTGGGGAAAACCTCCTGGGAATCTGAACGCAGATGGAGAGAATCTATTGGTATATGGGAAACAATATGGTAACGTATTCATAGGAGTTCAGCCAACATTTGGTTATGAAGGGGATCCTATGCGGTTGCTTTTCTCCAAATCTGCAAGCCCGCATCATGGATTTGCAGCATACTACTCTTTTGTTGAGAAAATTTTTAAAGCTGATGCTGTTCTTCACTTCGGGACACACGGCTCCCTTGAATTCATGCCTGGAAAGCAGGTGGGGATGAGTGATGTATGTTATCCAGACAGTCTGATTGGGAATATTCCCAATGTCTATTACTATGCTGCAAACAACCCTTCTGAGGCTACCATAGCCAAACGCAGGAGCTATGCAAATACCATTAGCTACCTGACTCCTCCAGCAGAAAATGCAGGACTTTACAAAGGTCTTAAGCAGTTAAGTGAGCTCATCTCCTCATACCAGTCCCTCAAGGACACCGGCCGTGGGCCACAAATTGTGAGCTCAATTATCAGCACAGCTAAACAATGTAATCTTGACAAGGATGTTGATCTGCCAGATGAGGGTGAAGAGATCCCAGCCAAAGAGCGTGATCTTGTGGTTGGAAAGGTGTATTCCAAGATCATGGAGATTGAGTCCCGACTGTTGCCTTGTGGACTCCATGTCATTGGTGAGCCACCCTCAGCCTTGGAAGCAGTTGCTACACTAGTGAACATAGCTGCACTTGATCGTCCTGAAGATGGTATTTCCTCTCTCCCATCTATACTAGCTGAGACTGTAGGAAGAAACATAGAGGAAATTTATAGAGGGAGTGACAAAGGAATATTGAAGGATGTAGAGCTTCTTCGGCAAATAACTGAAGCATCACGTGGAGCAATTACTTCCTTTGTGGAGCGCACCACTAATACGAAGGGCCAAGTTGTTGATGTAGCTGATAAACTTACCTCAATCCTTGGATTTGGCATAAATGAACCATGGATTCAGTACTTGTCAAACACCAAATTTTACCGAGCTGATAGGGAAAAACTCAGAACTTTGTTTGAGTTCTTGGGAGAATGTTTGAAGTTGGTTGTAGCTGATAATGAATTGGGAAGTTTAAAACAAGCCTTGGAGGGTAAATATGTGGAGCCAGGACCTGGTGGTGACCCAATTAGAAATCCTAAAGTTTTACCAACAGGGAAGAATATTCATGCCCTGGACCCACAAGCTATTCCTACTACAGCTGCTATGCAGAGTGCCAAAATAGTGGTAGATAGATTGATTGAGAGGCAGAAAATTGATAATGGAGGAAAGTATCCTGAGACAGTTGCACTTGTATTGTGGGGAACAGATAATATTAAGACATATGGTGAATCCCTGGCACAAGTCTTGTGGATGATTGGTGTGAAACCAATTTCTGATACCTTTGGAAGGGTCAACCGGGTGGAACCTGTGAGTCTTGAAGAGCTTGGAAGGCCTAGGATTGATGTCGTTGTTAATTGCTCTGGAGTATTCAGAGACCTCTTTATCAATCAGATGAATCTTCTGGATAGAGCAGTGAAGATGGTTGCTGAACTGGATGAACCAGCAGAGCAAAACTATGTAAGGAAGCATGCATTAGAACAAGCTCAAGCCCTTGGTATTGAAGTTCGAGAAGCAGCAACAAGGATCTTCTCCAATGCCTCAGGGTCCTACTCCTCAAACATTAACCTGGCTGTGGAGAATTCTTCATGGAATGATGAGAAGCAGCTCCAGGACATGTACCTTAGCCGAAAATCTTTTGCTTTTGATTGTGATGCCCCTGGTGCAGGCATGACTGAAAAAAGACAAGTCTTTGAGATGGCTCTGAGCACAGCAGATGCCACATTCCAAAACCTTGACTCATCAGAAATCTCTCTCACTGATGTTAGTCATTACTTTGACTCAGACCCAACTAACCTGGTTCAGAATCTAAGGAAAGATGGGAAGAAGCCAAGTGCATACATTGCTGACACAACCACAGCTAATGCCCAGGTAAGAACCCTTTCTGAGACTGTTCGACTTGATGCAAGAACCAAGCTGTTGAACCCCAAGTGGTATGAAGGCATGTTGTCTAGTGGTTATGAAGGTGTTCGTGAGATTGAGAAGAGGCTTACTAACACAGTTGGGTGGAGTGCAACTTCAGGCCAAGTTGACAACTGGGTGTATGAAGAAGCCAACACAACTTTCATTCAAGATGAGGAAATGCTGAAGAAACTGATGAACACAAATCCAAACTCCTTTAGGAAGCTGGTGCAGACATTCTTGGAAGCCAATGGACGTGGATATTGGGAAACTTCAGAACAAAACATTGAGAAGCTCAGGCAGTTGTACTCAGAAGTGGAAGACAAAATTGAAGGCATTGATCGTTGA 4146 0.4356 MASLVSSPFTLSKADQLSSLAQRHLFLHSFLPKKSSYFGSSKSSLRVKCAAIGNGLFTQTTPEVRRIVPEKNRNLPTVKIVYVVLEAQYQSSLSAAVRALNSNNKDASFEVVGYLVEELRDESTYKTFCKDLEDANIFIGSLIFVEELALRVKDAVEKERDRLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSPFFQLFKKKKQSSAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFVKMISGSYVPALKGTKMEYSEPVLYLDTGIWHPLAPCMYDDVKEYLNWYGTRRDANEKLKSPNAPVIGLVLQRSHIVTGDDGHYVAVIMELEARGAKVIPIFAGGLDFSGPVERFFIDPITKKPFINSAVSLTGFALVGGPARQDHPRAVEALRKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFAGRDPKTGKSHALHKRVEQLCTRAIKWAELKRKSKEEKKLAITVFSFPPDKGNVGTAAYLNVFSSIFSVLKDLQRDGYNVEGLPETSEALIEEVIHDKEAQFSSPNLNIAYKMSVREYQNLTPYATALEENWGKPPGNLNADGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVDLPDEGEEIPAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPEDGISSLPSILAETVGRNIEEIYRGSDKGILKDVELLRQITEASRGAITSFVERTTNTKGQVVDVADKLTSILGFGINEPWIQYLSNTKFYRADREKLRTLFEFLGECLKLVVADNELGSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKIVVDRLIERQKIDNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVKPISDTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPAEQNYVRKHALEQAQALGIEVREAATRIFSNASGSYSSNINLAVENSSWNDEKQLQDMYLSRKSFAFDCDAPGAGMTEKRQVFEMALSTADATFQNLDSSEISLTDVSHYFDSDPTNLVQNLRKDGKKPSAYIADTTTANAQVRTLSETVRLDARTKLLNPKWYEGMLSSGYEGVREIEKRLTNTVGWSATSGQVDNWVYEEANTTFIQDEEMLKKLMNTNPNSFRKLVQTFLEANGRGYWETSEQNIEKLRQLYSEVEDKIEGIDR. 1382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04850 1381 Pfam Domain of unknown function (DUF3479) 79 240 IPR022571 GO:0016851
Seca8g04850 1381 Pfam CobN/Magnesium Chelatase 244 1361 IPR003672 GO:0009058
Seca8g04850 1381 Coils Coil 1355 1381 - -
Seca8g04850 1381 CDD CobN_like 155 1252 IPR003672 GO:0009058
Seca8g04850 1381 NCBIfam magnesium chelatase subunit H 79 1379 IPR011771 GO:0015995|GO:0016851
Seca8g04850 1381 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC 26 1380 IPR003672 GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04850 Seca-Chr8 134621832 134627776 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04850 K03403 - gmx:100806079 2627.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04850 8 134621832 134627776 Seca8g04850 8 134621832 134627776 ECH
Seca8g04850 8 134621832 134627776 Seca8g04850 8 134621832 134627776 PCT