Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04847 ATGTCTAGCAATACAAAAGTTCTGGACCCTGCATTCCAGGGAGTGGGTCAAAGAGCAGGAACTGAAATATGGAGGATTGAGAATTTTCAGCCAGTTCCATTGCCCAAATCTGAGTATGGGAAATTCTACATGGGAGATTCATACATCATCTTGCAGACAACACAAGGCAAAGGAGGCACTTATTTTTATGATTTACACTTCTGGATTGGAAAGGACACAAGTCAGGATGAGGCTGGAACAGCAGCCATAAAAGCCGTAGAACTAGATGCAGCTCTTGGAGGACGTGCAGTGCAGCACAGAGAAATTCAAGGACATGAATCTGACAAATTTTTGTCATACTTTAAGCCATGTATAATACCATTAGAGGGGGGTGTTGCATCTGGATTTAGAAAACCAGAAGAGGAGGAGTTTGAAACACGTTTGTATGTATGCAAAGGGAAAAGAGTTGTCAGACTGAAGCAGGTCCCTTTTGCAAGGTCTTCATTGAACCATGATGATGTATTCATCCTTGACACTCAGAATAAGATTTATCAATTCAATGGTGCAAATTCCAATATTCAGGAAAGAGCCAAGGCTTTGGAAGTTATACAGTTTCTGAAAGAAAAATATCATGAAGGGAAATGTGATGTTGCAATTGTTGATGATGGCAAGTTAGACACAGAGTCAGACTCCGGTGAATTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTGGAAAGAAGGTAATCAGTGAGGATGATATCATTCCAGAGGCAATTCCTGCTCAGTTGTATAGTATCATTGATGGTGAGGTCAAATCTGTGGAAGGTGAACTTTCTAAGTCACTGTTGGAAAACAACAAATGCTATTTACTGGACTGTGGTGCTGAGGTATTTATCTGGGTTGGCCGGGTAACACAGGTTGAAGAACGAAAAGCAGCTTGCCAAGCAGCTGAGGAGTTTGTTGCAAGCCAAAATAGGCCAAAATCTACAAGGATAACCAGGATTATTCAAAGTTATGAGACACATTCATTTAAGTCCAACTTTGATTCTTGGCCATCAGGATCTGCTAGTACCGGTGCCGAGGAAGGAAGAGGAAAAGTTGCAGAAGCCAGACTGATAAGTGTGCTATGTTATGTACTGTCAGCATTGCTTAAGCAACAAGGTATGGGTGTCAAAGGAATGGGAAAAAGTACCCCTGCAAATGAGGAAATTCCACCTTTGCTTGAAGGAGGTGGAAAGATGGAGGTATGGCGAATCAATGGAAGTGCTAAGACCCCATTGCTAAAGGAGGATATTGGTAAATTTTATAGTGGAGATTGTTACATTGTATTGTACACATACCATTCTGGTGAGAGGAAAGAAGATTACTTTTTGTGCAGCTGGTTTGGCAAAGGCAGCATTGAGGAGGACCAGACAATGGCTACTCGGTTGGCTAATACAATGTCCAACTCATTAAAGGGTAGACCTGTGCAGGGTCGCATATTTGAAGGTAAAGAGCCACCACAGTTTGTTGCTCTTTTCCAACCCATGGTTGTCCTTAAGGGAGGTTTGAGCACTGGATACAAAAATTTTGTAGCAGACAAAGGTTTACCAGATGAAACATACACGGCTGAGTGTATTGCACTTATTCGAATTTCTGGAACTTCAATTCATAACAATAAGGCAGTGCAAGTTGATGCAGTGCCATCATCATTGAATTCTACTGAGTGTTTTGTCCTGCAATCTGGCTCTACAATTTTCACTTGGCATGGGAATCAGTGTTCCTTTGAACAACAGCAACTAGCAGCAAAGGTCGCAGAATTTTTAAGGCCAGGAGTTACGTTAAAGCATGCTAAAGAAGGTACTGAAAGCTCAGCTTTCTGGTTTGCACTAGGAGGAAAACAAGGTTACACCAGCAAAAAAGTTACTAATGATGCTGTGAGAGAGCCACATCTGTTCACTTTCTCATTTAATAAGGGTAGCATTTCTTGTCATGCAGAGGAAGTTTACAACTTCTCCCAAGATGATTTGTTAACAGAGGATATCCTCATACTGGACACACATGCAGAAGTGTTCATTTGGATCGGACAGTCAGTGGACCCAAAAGAAAAGCAAAATGCTTTTGAAATTGGCCAGAAATACATAGATATGGCTGCATCTTTGGAGGGACTATCTCCACATGTACCGATATATAAAGTAACAGAAGGGAATGAACCTTGCTTTTTCACAACATACTTTTCATGGGATCATGCAAAAGCTACGGTTCAGGGGAACTCATTCCAGAAAAAGGTGTCACTACTCTTTGGGATTGGCCATGCTGTGGAGGAAAAGTCAAATGGGTCAAGTCTAGGGGGACCAAGACAAAGAGCAGAAGCTTTGGCTGCCTTATCTTCTGCTTTTAGTTCATCGTCTGAGAAATCATCCAGTATGTCACAGGATAGATTGAATGGGTTAAACCAAGGAGGACCCAGACAAAGAGCGGAAGCTTTAGCTGCTTTAAATTCGGCATTTAATTCATCATCTGGGACGAAGACTTTTAGTCCTAGGGCATCTGGAAAGGGTCAAGGATCACAAAGAGCAGCAGCAGTAGCTGCTCTTTCATCAGTTCTTACTGCTGAAAAGAAGAAATCTTCACCTGATGGTTCCCCTGTGGCTAGCAGCAGTCCTGTTGCAGAAAGTAGCACTCCTGAAGCTAAAAGTGGAAATGCCAATTCTGAAGTCGAAGAAGCTGAAGAAGCTAAGGAAACAGAAGAACTGACCCCTGAAACTGCAAAACAAGAAAATGCGGAGGATGGAAATGGGAGTCAAAGTAGTCAAAAGACGTTCAGTTATAATCAATTAAAGACTAAATCTGGTTATAATTTGTCTGGCATTGATCTTCAGCGCAGAGAGGCCTATCTGTCGGACGACGAATTCAAAACTGTATTTGGAATGGAAAAGGAAGCATTTTATAAATTGCCAAGATGGAAGCAAGACATGCTGAAAAGGAAATTCGAATTGTTCTAG 2964 0.4177 MSSNTKVLDPAFQGVGQRAGTEIWRIENFQPVPLPKSEYGKFYMGDSYIILQTTQGKGGTYFYDLHFWIGKDTSQDEAGTAAIKAVELDAALGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFRKPEEEEFETRLYVCKGKRVVRLKQVPFARSSLNHDDVFILDTQNKIYQFNGANSNIQERAKALEVIQFLKEKYHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDIIPEAIPAQLYSIIDGEVKSVEGELSKSLLENNKCYLLDCGAEVFIWVGRVTQVEERKAACQAAEEFVASQNRPKSTRITRIIQSYETHSFKSNFDSWPSGSASTGAEEGRGKVAEARLISVLCYVLSALLKQQGMGVKGMGKSTPANEEIPPLLEGGGKMEVWRINGSAKTPLLKEDIGKFYSGDCYIVLYTYHSGERKEDYFLCSWFGKGSIEEDQTMATRLANTMSNSLKGRPVQGRIFEGKEPPQFVALFQPMVVLKGGLSTGYKNFVADKGLPDETYTAECIALIRISGTSIHNNKAVQVDAVPSSLNSTECFVLQSGSTIFTWHGNQCSFEQQQLAAKVAEFLRPGVTLKHAKEGTESSAFWFALGGKQGYTSKKVTNDAVREPHLFTFSFNKGSISCHAEEVYNFSQDDLLTEDILILDTHAEVFIWIGQSVDPKEKQNAFEIGQKYIDMAASLEGLSPHVPIYKVTEGNEPCFFTTYFSWDHAKATVQGNSFQKKVSLLFGIGHAVEEKSNGSSLGGPRQRAEALAALSSAFSSSSEKSSSMSQDRLNGLNQGGPRQRAEALAALNSAFNSSSGTKTFSPRASGKGQGSQRAAAVAALSSVLTAEKKKSSPDGSPVASSSPVAESSTPEAKSGNANSEVEEAEEAKETEELTPETAKQENAEDGNGSQSSQKTFSYNQLKTKSGYNLSGIDLQRREAYLSDDEFKTVFGMEKEAFYKLPRWKQDMLKRKFELF. 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04847 987 MobiDBLite consensus disorder prediction 858 931 - -
Seca8g04847 987 CDD gelsolin_S2_like 138 232 - -
Seca8g04847 987 SMART VILL_6 533 620 IPR007122 GO:0051015
Seca8g04847 987 SMART VILL_6 637 734 IPR007122 GO:0051015
Seca8g04847 987 SMART VILL_6 137 234 IPR007122 GO:0051015
Seca8g04847 987 SMART VILL_6 19 117 IPR007122 GO:0051015
Seca8g04847 987 SMART VILL_6 405 503 IPR007122 GO:0051015
Seca8g04847 987 SMART VILL_6 252 344 IPR007122 GO:0051015
Seca8g04847 987 SUPERFAMILY Actin depolymerizing proteins 396 541 - -
Seca8g04847 987 SUPERFAMILY Actin depolymerizing proteins 129 237 - -
Seca8g04847 987 Gene3D Severin 133 246 IPR029006 -
Seca8g04847 987 ProSiteProfiles Headpiece (HP) domain profile. 922 987 IPR003128 GO:0003779|GO:0007010
Seca8g04847 987 CDD gelsolin_S3_like 254 343 - -
Seca8g04847 987 Pfam Villin headpiece domain 952 987 IPR003128 GO:0003779|GO:0007010
Seca8g04847 987 CDD gelsolin_S1_like 12 124 - -
Seca8g04847 987 Gene3D Severin 249 356 IPR029006 -
Seca8g04847 987 FunFam Villin-4 248 354 - -
Seca8g04847 987 SMART VHP_1 952 987 IPR003128 GO:0003779|GO:0007010
Seca8g04847 987 Gene3D Severin 6 132 IPR029006 -
Seca8g04847 987 MobiDBLite consensus disorder prediction 824 845 - -
Seca8g04847 987 MobiDBLite consensus disorder prediction 824 840 - -
Seca8g04847 987 Coils Coil 886 906 - -
Seca8g04847 987 Gene3D Severin 536 626 IPR029006 -
Seca8g04847 987 MobiDBLite consensus disorder prediction 789 811 - -
Seca8g04847 987 FunFam Villin-like 1 627 750 - -
Seca8g04847 987 SUPERFAMILY VHP, Villin headpiece domain 920 987 IPR036886 GO:0003779|GO:0007010
Seca8g04847 987 MobiDBLite consensus disorder prediction 789 805 - -
Seca8g04847 987 CDD gelsolin_S5_like 533 621 - -
Seca8g04847 987 SUPERFAMILY Actin depolymerizing proteins 9 148 - -
Seca8g04847 987 PRINTS Gelsolin family signature 483 503 IPR007122 GO:0051015
Seca8g04847 987 PRINTS Gelsolin family signature 660 682 IPR007122 GO:0051015
Seca8g04847 987 PRINTS Gelsolin family signature 450 468 IPR007122 GO:0051015
Seca8g04847 987 PRINTS Gelsolin family signature 689 708 IPR007122 GO:0051015
Seca8g04847 987 PRINTS Gelsolin family signature 606 625 IPR007122 GO:0051015
Seca8g04847 987 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Seca8g04847 987 PRINTS Gelsolin family signature 424 440 IPR007122 GO:0051015
Seca8g04847 987 PRINTS Gelsolin family signature 546 566 IPR007122 GO:0051015
Seca8g04847 987 Gene3D Severin 627 750 IPR029006 -
Seca8g04847 987 SUPERFAMILY Actin depolymerizing proteins 223 345 - -
Seca8g04847 987 MobiDBLite consensus disorder prediction 858 888 - -
Seca8g04847 987 MobiDBLite consensus disorder prediction 912 931 - -
Seca8g04847 987 FunFam Gelsolin 532 626 - -
Seca8g04847 987 Gene3D Severin 401 535 IPR029006 -
Seca8g04847 987 PANTHER VILLIN 3 977 IPR007122 GO:0051015
Seca8g04847 987 FunFam Gelsolin 6 131 - -
Seca8g04847 987 SUPERFAMILY Actin depolymerizing proteins 523 627 - -
Seca8g04847 987 CDD gelsolin_S4_like 399 500 - -
Seca8g04847 987 CDD gelsolin_S6_like 635 735 - -
Seca8g04847 987 FunFam Villin-like 1 132 247 - -
Seca8g04847 987 Pfam Gelsolin repeat 655 728 IPR007123 -
Seca8g04847 987 Pfam Gelsolin repeat 545 596 IPR007123 -
Seca8g04847 987 Pfam Gelsolin repeat 29 111 IPR007123 -
Seca8g04847 987 Pfam Gelsolin repeat 150 217 IPR007123 -
Seca8g04847 987 Pfam Gelsolin repeat 267 337 IPR007123 -
Seca8g04847 987 Pfam Gelsolin repeat 422 496 IPR007123 -
Seca8g04847 987 SUPERFAMILY Actin depolymerizing proteins 627 748 - -
Seca8g04847 987 Gene3D Villin headpiece domain 909 987 IPR036886 GO:0003779|GO:0007010
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04847 Seca-Chr8 134528541 134546397 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04847 - - gmx:100788765 1623.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04847 8 134528541 134546397 Seca8g04847 8 134528541 134546397 ECH
Seca8g04847 8 134528541 134546397 Seca8g04847 8 134528541 134546397 PCT