Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04788 ATGTCATTCTTAAGTAACTTGGACACATCACACATAAAACTTGAAAAGCTAGCATATCAATTAGGATTAATTATAATGGCAACCCAAACAGTACTGTGTGAATCTCAACTTCCTGTCATTGACTTCTCCAATGAAAACATGAAACCTGGCACCGATACATGGCTTGCAACCTGTCAAGTGGTGCGGAGAGGGTTTGAAGATTACGGCTGTTTCCTAGCAAAGTTTGATAAGGTTGGTCCCGAGCTTGTGAATTCAGTTTTTCATTCAATGGAAGAACTATTCGGTCTTCCATTAGAAACAAAGAAGAGAAAAACCAGTGATAAACCAAACCATGGTTACACTGGACAAGTATCCGCATCCCCTCTATTTGAATCTTTCGCAGTTGACAATCCATCGAATATAGAAGATTGTCAAAAATTCGCAAACATCATGTGGCCAGCAGGAAATGATCGTTTCTGTGAAAGTGTCAATGAGTATGCAAAGCTGTTGCAAGAACTAGATCAAACCGTGAAGAAGATGGTGTTTGAAAGCTATGGTCTGGACAAGCAGAAGTGTGAGTCATTCCTTGAATCAACCAATTACGCGTTTCGGAGCTACAAATATAGGATACCTGGGATGGATGAGAGCAATGTGGGAGTGAATACCCATACCGACTCAACCTTCATAACAATATTGCATCAACAGATAGATGGCCTGGAAATTCAATTGAAAGATGGGGAATGGTTTGGGGTTGATGCCTCACCACTGTTTTGTGTCATGGCTGGCGATGCATTTACGGTATGGAGTAGTGAAAGGATACGGGCTTGTGAACACCGTGTCCTGTTGAAATCAAAGGTAATTAGGTACTCCTTGGGACTACTTTCGTACAGTAATAAGATGGTGCAGACATTGGAGGATCTAGTCGATGAGGAACATCCTATACGTTATAAGCCATTCGACCATTACGGATACGTTGGTTACCGTTTCACAGAACAAGCCGTAAAACATACCAGTCGAATCAAAGCATATTGTGGCATTGTTGACTTCACCGACGAAAACCTGAAGCCTGGAACAGATTCATGGCTTTCAGCCTGTAATGTGGTGCGAACTGCACTTGAGGATCACGGATGTTTCATGGCACGCTACGAGAAAGTTGGGCCAGAGCTACTCAACTCTATTGTAGCTGCAATGGAAGAACTATTTGGTCTCCCATTGGAAACAAAAAAGCAAGAGACTAGTAAGAAGCTTTTCCATGGTTACTATGGACAAATTCCAGTTCTCCCCCTTTACGAAACATTTGGCATTGAGGATCCGTTTACTTTGAATGGTGAAAGTGTCCATGAGTATTCAAAGGTGTTGGTAGAATTAGACCATGTGGTGAAGAAAATGGTGTTTGAGAGCTATGGTGTGGACATGAAGCGATGCGAATCTTTCATAGAATCAGGGAATAATTATCTCCTTCGATGCCTCAAGTATAGACCACCTCAGATGGATGAGACTGATATGGGATTGCAGCCTCACACTGATTTGACCATGCAATCCATATTGCATCAGGTGAATAACGTTGATGGCTTAGAAGTTAAATTGAAGGATGGAGAGTGGATTGTGGTTGATCCCTCACCCTCCATGTTTGTGGTCATGGCTGGAGATGGTTTCAAGGTTTGGAGTAATGGCAGGATACGGCCATGCGAACACCGAGTTATAATGAATACAAAGGAAATTAGGTACTCAATGGGACTATTTACCTTTAATGATAAGATAGTGAACACTCCAGAGGAGCTAGTTGATGAGCAACATCCCTTACGTTATAAACCATTCGACAATTTTGAATACCTTGGTTTCTATGACAAAGAGAAAATCAGAGAGTCTGATTTACGAATCAAAGCCTATTGTGGCATACGAAATCAACAATAA 1893 0.4157 MSFLSNLDTSHIKLEKLAYQLGLIIMATQTVLCESQLPVIDFSNENMKPGTDTWLATCQVVRRGFEDYGCFLAKFDKVGPELVNSVFHSMEELFGLPLETKKRKTSDKPNHGYTGQVSASPLFESFAVDNPSNIEDCQKFANIMWPAGNDRFCESVNEYAKLLQELDQTVKKMVFESYGLDKQKCESFLESTNYAFRSYKYRIPGMDESNVGVNTHTDSTFITILHQQIDGLEIQLKDGEWFGVDASPLFCVMAGDAFTVWSSERIRACEHRVLLKSKVIRYSLGLLSYSNKMVQTLEDLVDEEHPIRYKPFDHYGYVGYRFTEQAVKHTSRIKAYCGIVDFTDENLKPGTDSWLSACNVVRTALEDHGCFMARYEKVGPELLNSIVAAMEELFGLPLETKKQETSKKLFHGYYGQIPVLPLYETFGIEDPFTLNGESVHEYSKVLVELDHVVKKMVFESYGVDMKRCESFIESGNNYLLRCLKYRPPQMDETDMGLQPHTDLTMQSILHQVNNVDGLEVKLKDGEWIVVDPSPSMFVVMAGDGFKVWSNGRIRPCEHRVIMNTKEIRYSMGLFTFNDKIVNTPEELVDEQHPLRYKPFDNFEYLGFYDKEKIRESDLRIKAYCGIRNQQ. 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04788 630 Gene3D - 340 628 IPR027443 -
Seca8g04788 630 Gene3D - 35 339 IPR027443 -
Seca8g04788 630 Pfam non-haem dioxygenase in morphine synthesis N-terminal 353 414 IPR026992 -
Seca8g04788 630 Pfam non-haem dioxygenase in morphine synthesis N-terminal 37 115 IPR026992 -
Seca8g04788 630 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 29 326 - -
Seca8g04788 630 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 340 604 - -
Seca8g04788 630 SUPERFAMILY Clavaminate synthase-like 340 612 - -
Seca8g04788 630 Pfam 2OG-Fe(II) oxygenase superfamily 204 284 IPR044861 -
Seca8g04788 630 Pfam 2OG-Fe(II) oxygenase superfamily 483 576 IPR044861 -
Seca8g04788 630 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 475 578 IPR005123 -
Seca8g04788 630 SUPERFAMILY Clavaminate synthase-like 33 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04788 Seca-Chr8 133365756 133378996 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04788 437 610 Glycosyltransferase AT5G59530 29.834 9.08e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04788 - - gmx:100777761 566.229