Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04782 ATGGTGGCCAGAATGATATTTGAAAGTTATGGTTTGGTGGAGCACTATGACACATACATAGGGTCAACAAGTTATTTACTTAGACTCTTGGCACACAAAGCACCGGAACAGGTTGAGCCTCAACTGGGTTTTGTGTCTCACACTGACAAGAGCTTCACAACAATTCTTCATCAGAATCATGTCAATGGACTCTCGGTGGAGACAAAGGATGGTAATTGGATTGATGTTGATTTCTCTTCACCTACTTCCTTTGTTGTCATGGCTGGAGATGCACTCATGCAGGCTTGGAGTAACGATAGAATAAAGGCTCCTAATCATAGAGTTTTGATGAATGGGAATGAAACAAGGTATTCTCTTGGTCTGTTTGCCTTCTACAGAGGGATTCTAAAAGTACCTGAAGAGCTAATCGATGAGGAACACCGATTGCAATATAAGCCATTTGATCATCTTGCATTACTGAACTTTGCTTACAGTGCTAATATTAAAGCCTATTGGGGCGTCTGA 504 0.4127 MVARMIFESYGLVEHYDTYIGSTSYLLRLLAHKAPEQVEPQLGFVSHTDKSFTTILHQNHVNGLSVETKDGNWIDVDFSSPTSFVVMAGDALMQAWSNDRIKAPNHRVLMNGNETRYSLGLFAFYRGILKVPEELIDEEHRLQYKPFDHLALLNFAYSANIKAYWGV. 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04782 167 Gene3D - 1 154 IPR027443 -
Seca8g04782 167 SUPERFAMILY Clavaminate synthase-like 2 160 - -
Seca8g04782 167 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 23 127 IPR005123 -
Seca8g04782 167 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 150 - -
Seca8g04782 167 Pfam 2OG-Fe(II) oxygenase superfamily 30 123 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04782 Seca-Chr8 133223599 133224279 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04782 27 145 Glycosyltransferase AT5G59530 32.558 8.03e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04782 - - gmx:100809268 301.597