Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04781 ATGGCTTCTGATGGACAGCTCAGGCTTCCTGTTCTTCATTTCACAAAGGAAGATTTGAAGCCCGGGACCAAATCCTGGTTATCAGCATGCACAAGTGTGCGCCAAGCATTTGAAGAACATGGTTGCTTTGTAGTTGTGTATGACAAAATTTCTCAAGAGCTTCAAAATGGTGTATTCAGTTCCTTGAAGGAGCTCTTCCATCTCCCAACAGAAACCAAATTGAAAAACAAATATGAGGGTAAACCATTGAAAGGCTATGTTGGACAACACCCCAAGATTCCTCTTCATGAAAGCATGGGTATAGATGAGGGAACAACACTTGAGGGAATTCAAAGTTTTGCAGAAAAAATGTGGCCTAACGGAAATGATAAGTTCTGTAAATATTTGTTTGAGTATGCAAAGCTAGCAGAAGGATTGGATCGGATGGTGGCCAGAATGATATTTGAAAGTTATGGTTTGGTGGAGCACTATGACACATACATAGGGTCAACAAGTTATCTACTTAGACTCTTGGCACACAAAGCACCGGAACAGGTTGAGCCTCAACTGGGTTTTGTGTCTCACACTGACAAGAGCTTCACAACAATTCTTCATCAGAATCATGTCAATGGACTCTCGGTGGAGACAAAGGATGGTAGTTGGATTGATGTTGATTTCTCTTCACCTACTTCCTTTGTTGTCATGGCTGGAGATGCACTCATGCAGGCTTGGAGTAACGATAGAATAAAGGCTCCTAATCATAGAGTTTTGATGAATGGGAATGAAACAAGGTATTCTCTTGGTCTGTTTGCCTTCTACAGAGGGATTCTAAAAGTACCTGAAGAGCTAATCGATGAGGAACACCCATTGCAATATAAGCCATTTGATCATCTTGCATTACTGAACTTCGCTTACAGTGCTAATATTAAAGCCTATTGTGGCGTCTAA 927 0.4121 MASDGQLRLPVLHFTKEDLKPGTKSWLSACTSVRQAFEEHGCFVVVYDKISQELQNGVFSSLKELFHLPTETKLKNKYEGKPLKGYVGQHPKIPLHESMGIDEGTTLEGIQSFAEKMWPNGNDKFCKYLFEYAKLAEGLDRMVARMIFESYGLVEHYDTYIGSTSYLLRLLAHKAPEQVEPQLGFVSHTDKSFTTILHQNHVNGLSVETKDGSWIDVDFSSPTSFVVMAGDALMQAWSNDRIKAPNHRVLMNGNETRYSLGLFAFYRGILKVPEELIDEEHPLQYKPFDHLALLNFAYSANIKAYCGV. 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04781 308 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 302 - -
Seca8g04781 308 Pfam 2OG-Fe(II) oxygenase superfamily 172 264 IPR044861 -
Seca8g04781 308 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 164 268 IPR005123 -
Seca8g04781 308 Pfam non-haem dioxygenase in morphine synthesis N-terminal 24 88 IPR026992 -
Seca8g04781 308 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 291 - -
Seca8g04781 308 SUPERFAMILY Clavaminate synthase-like 6 301 - -
Seca8g04781 308 Gene3D - 8 306 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04781 Seca-Chr8 133198807 133200581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04781 129 286 Glycosyltransferase AT5G59530 31.325 6.12e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04781 - - gmx:100809268 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04781 8 133198807 133200581 Seca8g04781 8 133198807 133200581 PCT