Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04704 ATGATGGGTAAGGATAGTAGTGTTATGAAGGCATGGGAGGCCACTGTGAGGAAGACACAAGCAGTGGCTAGGAAGCGTGCCAACAGCATATTTGGGACAACCTATGTGGCAAGTTCAGATGATGATGACAAAGATGATCAAAATGGAAGTGACACAATAGAATTATACCATGCAGAGAGGGTTCTTCCCAATGGGGATTACTATAAGGGAGAATGGGTAGATAATTTCCCACATGGGAAAGGCAAATACTTGTGGACAGATGGATGCATGTATGTTGGAGATTGGTACAAAGGGAAAACTATGGGAAAAGGTAGGTTCACTTGGCCTTCAGGGCCTACTTATGAAGGGGAATTCAAGGGTGGTTATATGGATGGGACAGGTACATATATAGCCTCTAATGGGGATACTTATAAGGGGCAATGGATTATGAATTTGAAACATGGTCAAGGTTTGAAGAGTTTTGCCAATGGAGATAGGTATGAAGGGGAATGGAGAAGGGGGTTGCAAGATGGGTTGGGGAAGTATCAGTGGAAGGATGAGAACTATTATGTTGGTGAATGGAGGAATGGGAGTATTTGGGGTAAAGGGACATTTGTTTGGACTAATGGGAATAGGTATGATGGGCATTGGGAAGATGGTGTGCCAAAAGGGAGTGGAACTTTTAAATGGCCTGATGGAAGTTTTTATGTGGGTAATTGGAGTAAGGATCCAAGGGATCAGAGTGGAACATACTATCCTTCAGGGTCATCACAGGAAGGCCATCTTGAGTGGGATCCTCAACAAATTTTCAATGAGTTGGGTGAGTATCAAATTTGTCCAGGGGAGAAAGTTTCAATTTTGCCATCACAGAAGAGACTTGCAGTGTGGAGGTCTACAAAGGGAGGGGATCATAAGCCTAGGAGAATGTCAGTGGATGGGAGGGTAAGTGTAGGGCTGGAAAAACCAAGTGATAGAATGCAATTATGGGGTGGTGGAGATGGAGATTTTAGTGGTGATAGAACTCCAAATGGAGGGGGTGCTTTGGAAGAAGAATTTTTAGGTATACATATAGGTGGTGCCAATTCAAGAGGGAATCAACTCCAAACTTTAAAAGCACCAAGGAAATCAAAGAGGCAGGGAGAGACCATATGCAAAGGACACAAAAATTATGAGCTCATGCTCAATTTGCAATTGGGAATCAGGCATTCTGTTGGAAGACCTGCCCCCTCAGCATCTTTTGATTTGAAGCCTTCAGCTTTTGATTCCAAGGAGAAAGTGTGGACAAGATTTCCTCCTGAAGGATCCAAATATACTCCACCACATCCATCATGTGAGTTCAGGTGGAAGGACTATTGTCCTGTAGTTTTTAGAACACTTAGGAAGCTATTCAAGGTGGATGCAGCTGATTACATGTTATCCATATGTGGAAATGATGCCCTGCGTGAACTTTCCTCTCCTGGAAAAAGTGGCAGCTTCTTTTACTTGACCAATGATGACCGTTACATGATTAAGACAATGAAGAAAGCTGAGGCAAAAGCTCTCTTGAGAATGCTTCCAGCTTATTACAATCATTTTCGAGCATTTGAAAATTCTCTAGTGACAAAGTTCTATGGCCTGCATTGTGTAAAATTAACTGGACCTACTCAGAAGAAGGTTCGGTTTATCATAATGGGCAACCTCTTTTGTTCCGAGTATACTATCCATAGACGCTTTGATTTGAAGGGTTCTTCACTTGGTCGCATAACAATTAAGCCTGAGTCAGAGATTACTGCAACCACTATCCTTAAAGATCTTGATTTAAATTTTATATTTAGATTGCAACGATCTTGGTTTCAAGAATTTTGCAGGCAAATTGATAGGGACTGTGAGCTTCTAGAACAAGAGGGAATTATGGACTATAGTCTGTTAGTTGGCATTCATTTCAAAGATATATCACAAGAAGGGGATATTATTCCTTCAGCTTCAGGACAGCACACTCCTAGTGGTGATTCAGAGAGTGAAGGAACTCCTCATATTTCACGAGCAGACATGGATCAACTTCTTCTAGATCCTTCCAGGTGGGCAAGTATCAAATTGGGTGTGAATATGCCAGCTAGAGTTGAAAGGACAGTGAGAAGAAATGGTTGTGAACTACAGCTTGTAGGAGAACCAATTGGAGAGTTCTATGAGGTTGTGTTGTTTTTTGGTGTCATAGATATACTTCAAGACTATGACATAAGCAAGAAGCTTGAACATGCCTACAAGTCCATTCAATATGACCCAACTTCAATATCAGCCGTTGATCCAAGACAATACTCAAGGCGTTTTCGTGACTTCATATTCAGAATATTTTCTGAAGACTCTTGA 2325 0.4163 MMGKDSSVMKAWEATVRKTQAVARKRANSIFGTTYVASSDDDDKDDQNGSDTIELYHAERVLPNGDYYKGEWVDNFPHGKGKYLWTDGCMYVGDWYKGKTMGKGRFTWPSGPTYEGEFKGGYMDGTGTYIASNGDTYKGQWIMNLKHGQGLKSFANGDRYEGEWRRGLQDGLGKYQWKDENYYVGEWRNGSIWGKGTFVWTNGNRYDGHWEDGVPKGSGTFKWPDGSFYVGNWSKDPRDQSGTYYPSGSSQEGHLEWDPQQIFNELGEYQICPGEKVSILPSQKRLAVWRSTKGGDHKPRRMSVDGRVSVGLEKPSDRMQLWGGGDGDFSGDRTPNGGGALEEEFLGIHIGGANSRGNQLQTLKAPRKSKRQGETICKGHKNYELMLNLQLGIRHSVGRPAPSASFDLKPSAFDSKEKVWTRFPPEGSKYTPPHPSCEFRWKDYCPVVFRTLRKLFKVDAADYMLSICGNDALRELSSPGKSGSFFYLTNDDRYMIKTMKKAEAKALLRMLPAYYNHFRAFENSLVTKFYGLHCVKLTGPTQKKVRFIIMGNLFCSEYTIHRRFDLKGSSLGRITIKPESEITATTILKDLDLNFIFRLQRSWFQEFCRQIDRDCELLEQEGIMDYSLLVGIHFKDISQEGDIIPSASGQHTPSGDSESEGTPHISRADMDQLLLDPSRWASIKLGVNMPARVERTVRRNGCELQLVGEPIGEFYEVVLFFGVIDILQDYDISKKLEHAYKSIQYDPTSISAVDPRQYSRRFRDFIFRIFSEDS. 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04704 774 SMART morn 112 133 IPR003409 -
Seca8g04704 774 SMART morn 158 179 IPR003409 -
Seca8g04704 774 SMART morn 227 248 IPR003409 -
Seca8g04704 774 SMART morn 204 225 IPR003409 -
Seca8g04704 774 SMART morn 89 110 IPR003409 -
Seca8g04704 774 SMART morn 66 87 IPR003409 -
Seca8g04704 774 SMART morn 135 156 IPR003409 -
Seca8g04704 774 SMART morn 181 202 IPR003409 -
Seca8g04704 774 SUPERFAMILY SAICAR synthase-like 378 770 - -
Seca8g04704 774 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 381 770 IPR002498 GO:0016307|GO:0046488
Seca8g04704 774 FunFam Phosphatidylinositol 4-phosphate 5-kinase 368 552 - -
Seca8g04704 774 PIRSF PIP5K_plant 4 774 IPR017163 GO:0005524|GO:0016308
Seca8g04704 774 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 77 771 IPR023610 -
Seca8g04704 774 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 468 768 IPR002498 GO:0016307|GO:0046488
Seca8g04704 774 Gene3D - 553 770 - -
Seca8g04704 774 Gene3D - 212 271 - -
Seca8g04704 774 Gene3D - 166 211 - -
Seca8g04704 774 Gene3D - 121 165 - -
Seca8g04704 774 Gene3D - 59 120 - -
Seca8g04704 774 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 63 190 - -
Seca8g04704 774 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 368 552 IPR027484 -
Seca8g04704 774 Pfam MORN repeat 68 90 IPR003409 -
Seca8g04704 774 Pfam MORN repeat 229 249 IPR003409 -
Seca8g04704 774 Pfam MORN repeat 183 205 IPR003409 -
Seca8g04704 774 Pfam MORN repeat 137 159 IPR003409 -
Seca8g04704 774 Pfam MORN repeat 91 111 IPR003409 -
Seca8g04704 774 Pfam MORN repeat 206 227 IPR003409 -
Seca8g04704 774 Pfam MORN repeat 114 136 IPR003409 -
Seca8g04704 774 Pfam MORN repeat 160 180 IPR003409 -
Seca8g04704 774 CDD PIPKc_AtPIP5K_like 382 769 - -
Seca8g04704 774 SMART PIPK_2 409 771 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04704 Seca-Chr8 131562626 131567420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g04704 1 774 Acyl Lipid Metabolism Gene Families AT3G56960 69.554 0.0 1146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04704 K00889 - gmx:100782728 1414.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04704 8 131562626 131567420 Seca8g04704 8 131562626 131567420 ECH