Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g04693 ATGGAGAGCAGCCACATTGACTCCTTCAAAGGTCGGACCAAGAAGCCCTCCGATGACCTCATCAATCTCCTTCACGGCTCCGATCCAATCCGAGTCGAACTCACTCGTCTCGACAACCAACTTCGAGAGAAAGACAGAGAATTGGGGGAGGCTCTTGCAGAAATTAAGTCCTTGAGGAACTCGGAACGTCTTAAAGAAAAGGGTGTTGAAGAGCTAGCAGATGAGCTCAACAAGGTGGATGAAAAGCTAAAAGCAACTGAAGCACTACTGGAAAGTAAGAACCTTGAAATAAAAAAAATCAATGATGAAAAAAGGGCAGCATTGGCTGCACAATTTGCTGCTGAAGCAACACTTAGAAGGGTTCATGCTGCTCAGAAAGATGATGAAATGCCTCCTATTGAAGCCATTATCACACCACTGGAGGCAGAGCTCAAGCTGGCTAGAATGGAGGTGACAAAGTTGCAGGATGACAATAGAGCACTAGATCGATTGACTAAATCAAAGGAGGCTGCACTTCTTGAGGCTGAGAGGACTGTTCAGATTGCTTTGGCAAAAGCATCCTTGGTTGATGATCTGCAAAACAAAAACCAAGAGCTAATGAAACAGATTGAAATATGTCAGGAGGAGAACAAAATCCTGGACAAAATGCATAGACAAAAGGTCGCTGAAGTTGAAAAGCTAACCCAAACTGTTCGTGAGCTTGAAGAGGCTGTCTTGGCTGGTGGTGCTGCTGCTAACGCTGTCCGTGATTACCAGCGGAAAATGCAAGAGATGAATGAAGAGAGGAAAGTTTTGGAGCGGGAAGTGGCTCGTGCTAAAGTTACTGCAAACAGGGTTGCCACTGTAGTTGCAAATGAGTGGAAAGATGCTAATGACAAAGTGATGCCTGTAAAGCAGTGGTTAGAAGAAAGGAAGTTTTTTCAGGCATGTAACCAACTCAGAAATGGTGAAATGCAACAACTACGAGATAAACTGGCTGTAGCTGAGCGTACTGCAAAAGCAGAAGCACAAATGAAGGAAAAATATCAATTGCGCTTCAAAATTTTGGAAGACAGGATTAAAGCATCTAATGGTAATTCCAAACTCACTGCACTAGATGGAAGAAACATGGCTAGTGGGCCTTCACGGCGTCAGTCTATTGGCGGAGCTGAGATTCTCTCTGGATCTTACTCCAATGGATACCCATCAAGGAAAAGCTCAAGTTCAATTTCAAAATCTGGGTCTGTACGATCAAATAGTGCAATTGTGTTACTAAAGCATGCCAAGCTCTCATCTAGATCATTTGATGGTGGTAGTAGATCCCTGGAGAGAGAGAGGCCAACCTCAGTTGCAAATGAGCGAGATAACATGCCAACCAAAACTAATGATCAGACCACCAAGACAGTTACTACACACACAGAGAGTGCCAATGGTACTCCAATTGAAAAAACCAGAGCAGATAATGAAGACTATGTTTCAGGAATGCTGTATGACATGTTGCAAAAAGAGGTCATATCTCTGAGGAAAGCTTGTCAGGAAAAAGATCAGACCCTTAAAGACAAGGATGATGCAATAGAGGTGTAA 1563 0.4351 MESSHIDSFKGRTKKPSDDLINLLHGSDPIRVELTRLDNQLREKDRELGEALAEIKSLRNSERLKEKGVEELADELNKVDEKLKATEALLESKNLEIKKINDEKRAALAAQFAAEATLRRVHAAQKDDEMPPIEAIITPLEAELKLARMEVTKLQDDNRALDRLTKSKEAALLEAERTVQIALAKASLVDDLQNKNQELMKQIEICQEENKILDKMHRQKVAEVEKLTQTVRELEEAVLAGGAAANAVRDYQRKMQEMNEERKVLEREVARAKVTANRVATVVANEWKDANDKVMPVKQWLEERKFFQACNQLRNGEMQQLRDKLAVAERTAKAEAQMKEKYQLRFKILEDRIKASNGNSKLTALDGRNMASGPSRRQSIGGAEILSGSYSNGYPSRKSSSSISKSGSVRSNSAIVLLKHAKLSSRSFDGGSRSLERERPTSVANERDNMPTKTNDQTTKTVTTHTESANGTPIEKTRADNEDYVSGMLYDMLQKEVISLRKACQEKDQTLKDKDDAIEV. 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g04693 520 Pfam Microtubule-associated protein 70 18 519 IPR009768 GO:0007010|GO:0008017
Seca8g04693 520 Coils Coil 318 338 - -
Seca8g04693 520 MobiDBLite consensus disorder prediction 445 474 - -
Seca8g04693 520 Coils Coil 144 164 - -
Seca8g04693 520 MobiDBLite consensus disorder prediction 388 407 - -
Seca8g04693 520 MobiDBLite consensus disorder prediction 359 382 - -
Seca8g04693 520 Coils Coil 189 237 - -
Seca8g04693 520 Coils Coil 34 61 - -
Seca8g04693 520 Coils Coil 69 110 - -
Seca8g04693 520 Coils Coil 520 520 - -
Seca8g04693 520 MobiDBLite consensus disorder prediction 426 474 - -
Seca8g04693 520 Coils Coil 248 275 - -
Seca8g04693 520 PANTHER MICROTUBULE-ASSOCIATED PROTEIN 70-2 15 520 IPR009768 GO:0007010|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g04693 Seca-Chr8 131345614 131352057 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g04693 - - gmx:100814485 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g04693 8 131345614 131352057 Seca8g04693 8 131345614 131352057 ECH