Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03443 ATGCACATCAAGGAAACGGTCATGAAATGGACTTTGCCAATGATAGTATGGCCAAAAAAATTTCTTCATCCTGTGTTTGACTTCATGCCATATAGGATTTTCACTAATAGAAGCTTTGTAATGGCAGGCCGAGTCTATATCCTGGATATGTATAACCCTGGAATATATCCTTTGGATTATGAGGCAAGAAACTACATAAATCAGAAAGTTGAAGTAAAGAGTGGGACTCTTACAGAAGAGTACCTGCAAAAATTAGATGAAGCACTTGAGGTTGCTGGGCAAAGGTTCAAACCCGAGTTGGTAATTTATAATGCCGGAACTGACATCCTAGAAGGTGATCCATTAGGAAGGTTGAAGATCAGTCCGGACGGAATTGCTCTTAGAGATGAGAAAGTTTTTCGGTTTGCTCGTGAGAAGAACATTCCTATCGTCATGCTTACTTCAGGTGGATACATGAAGTCCAGTGCTAAAGTCATTGCAGATTCAATAGCCAATCTCTCGAAGAAATGCTTGATAGAAACGAGTGGAGGTCCAAAGGCTACATAA 546 0.4029 MHIKETVMKWTLPMIVWPKKFLHPVFDFMPYRIFTNRSFVMAGRVYILDMYNPGIYPLDYEARNYINQKVEVKSGTLTEEYLQKLDEALEVAGQRFKPELVIYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAREKNIPIVMLTSGGYMKSSAKVIADSIANLSKKCLIETSGGPKAT. 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03443 181 Gene3D Histone deacetylase domain 31 176 IPR037138 -
Seca8g03443 181 PANTHER HISTONE DEACETYLASE 2-RELATED 36 167 - -
Seca8g03443 181 Pfam Histone deacetylase domain 39 162 IPR023801 -
Seca8g03443 181 SUPERFAMILY Arginase/deacetylase 39 163 IPR023696 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03443 Seca-Chr8 98789876 98793993 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03443 K11418 - gmx:100781276 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03443 8 98789876 98793993 Seca8g03443 8 98789876 98793993 ECH