Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03414 ATGGAGAACGGAGATATCCCTGAGAATGCCAATGAGCATTGTCCAGGTCCTCAGTCTGAATCTGCTGGAAAATCCGATGCATGTGAAGGATGCCCTAATCAGCAAATTTGTGCCACTGCTCCCAAAGGACCTGACCCTGATCTGGTTGCCATTGCAGAAAGAATGGCTACTGTGAAACATAAGATATTGGTCTTATCTGGAAAGGGAGGAGTTGGCAAGAGCACTTTTTCTGCCCAGCTGGCATTTGCTTTAGCGGCAAAGGATTTTCAAGTGGGTCTTCTTGACATTGACATTTGTGGTCCAAGCATCCCAAAGATGCTTGGCCTAGAAGGTCAGGAGATTCACCAGAGCAACCTTGGGTGGTCTCCTGTCTATGTGGAGTCCAACCTTGGGGTCATGTCAATTGGGTTCATGCTTCCAAATCCCGATGAAGCTGTTATATGGAGAGGTCCACGCAAAAATGGGCTTATAAAACAGTTTTTAAAAGATGTATACTGGGGTGAACTTGATTTTCTAATTGTTGATGCCCCACCTGGAACCTCAGATGAACACATTTCAATTGTTCAATGCCTTGATGCCACTGGATTAGATGGTGCAATCATAGTTACTACTCCTCAACAAGTCTCTCTTACAGATGTGAGAAAAGAAGTGAATTTTTGCAAGAAAGTTGGAGTGAAAGTTCTTGGGGTTGTAGAGAATATGAGTGGCCTGTGCCAGCCCATCAGAGATTTCAAGTTTCTGAAGATGACAGATAATGGTGAGCAGAAAGATGTTACAGAGTGGATTTTGGAATACATGACAGAAAAAGCGCCAGAAATGCTGAATTTGATTGCTTGCACTGAAGTATTTGATAGTAGTGGTGGTGGAGCAGTGAAGATGTGCAACGAAATGGGGGTACCCTTTCTCGGTAAGGTTCCTTTAGACCCGCAACTTTGTAAGGCAGCTGAAGAAGGTAGATCCTGCTTTGCTGGTAAGGATTGTATTGTGAGTGCTCCGGCATTAAAGAATATTATTGAGAAGTTGATGGAAACTAACGGGTTGTCAATGTCAGTAAGTAATGGAGTGTAG 1068 0.4373 MENGDIPENANEHCPGPQSESAGKSDACEGCPNQQICATAPKGPDPDLVAIAERMATVKHKILVLSGKGGVGKSTFSAQLAFALAAKDFQVGLLDIDICGPSIPKMLGLEGQEIHQSNLGWSPVYVESNLGVMSIGFMLPNPDEAVIWRGPRKNGLIKQFLKDVYWGELDFLIVDAPPGTSDEHISIVQCLDATGLDGAIIVTTPQQVSLTDVRKEVNFCKKVGVKVLGVVENMSGLCQPIRDFKFLKMTDNGEQKDVTEWILEYMTEKAPEMLNLIACTEVFDSSGGGAVKMCNEMGVPFLGKVPLDPQLCKAAEEGRSCFAGKDCIVSAPALKNIIEKLMETNGLSMSVSNGV. 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03414 355 ProSitePatterns Mrp family signature. 166 182 IPR000808 GO:0005524
Seca8g03414 355 Gene3D - 54 350 IPR027417 -
Seca8g03414 355 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 321 IPR027417 -
Seca8g03414 355 Hamap Iron-sulfur cluster carrier protein. 53 342 IPR019591 GO:0005524|GO:0016226|GO:0051536|GO:0140663
Seca8g03414 355 MobiDBLite consensus disorder prediction 1 27 - -
Seca8g03414 355 Pfam NUBPL iron-transfer P-loop NTPase 278 341 IPR033756 -
Seca8g03414 355 Pfam NUBPL iron-transfer P-loop NTPase 58 241 IPR033756 -
Seca8g03414 355 PANTHER NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED 9 344 IPR019591 GO:0005524|GO:0016226|GO:0051536|GO:0140663
Seca8g03414 355 CDD Mrp_NBP35 60 313 IPR019591 GO:0005524|GO:0016226|GO:0051536|GO:0140663
Seca8g03414 355 Hamap Cytosolic Fe-S cluster assembly factor NUBP1 [NUBP1]. 7 346 IPR028601 GO:0016226|GO:0051536|GO:0051539
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03414 Seca-Chr8 98098331 98101824 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03414 - - gmx:100820246 676.011