Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03403 ATGTACTACAAAGGAGTTTACCACATTTTCTACCAATATAACCCTTATGGGGCAACCTTTGGTGATATGGTATGGGGTCACTCTATATCCTATGACCTCATCAATTGGACTTATCTAAATAATGCAATTGAACCAAGTGAGCCCTATGACAACAAGGGCTGCTACTCAGGCTCAGTTACTATACTTCCAGGGGAAAAACCTCTTATCTTATATACAGGGGCAGATGATGATAATAAACATCAGGTTCAGTGCTTAGCTTTGCCAAGGAATCTATCAGATCCGTACTTAAGGGAATGGGACAAATACCCTCAAAACCCTGTCATGATTCAACCTAGTGGAGTTGAAGAGAATAACTTCAGAGACCCCTCAACTGCTTGGCAGGGAAAGGATGGAAAATGGAGGGTGCTCGTGGGTGCTCAAAATGGTGATGAAGGGAAGGCCATTCTCTGCAAAAGTGAAGATTTTGTTCATTGGACAGTGGACCCAAATCCTTTCTTTGCAACAGATAATACGGGAGTTTGTGAATGCCCTGATTTCTTTCCTGTGTTCATCAATAGCACAAGTGGCGTGGATTATACATCTGTTGAAAATCAGAACATGAGGCATGTTTTGAAGATAAGCTATCTACGCAGACAGCATGACTATTATTTTGTTGGCAAATATGTATCTGATCAGGAAAACTTTATTCCTGATGTAAAATATACAGGGACTAGTTCAGAGTTGAGGATGGACTATGGGAAATTTTATGCTTCCAAGTCATTTTTTGACTATGCCAAAAATAGGAGGATAGTGTGGGGATGGGTGCCTGAGTCTGACACCACACAAGATGACATTGAGAAAGGATGGGCTGGCCTACAGACGATTCCAAGGCAAGTTTGGCTTGATAAAACAGGGAAGCGATTGATACAGTGGCCAATTGAAGAGTTAGAGAAACTTCGTGACAAGCAAATCAGTATAACTGGAGAGAAACTCGTCCCTGGATCAACGCTTGAAGTCACTGGTATCACTGCATCACAAGCCGATGTGGAAGTGTTGTTTGAGCTTCCTGAACTAGAAAGTGCAGAGTGGCTGGATTCCAGTGAAGTTGATCCACAACTACTCTGTAGTGAAGAATATGCATCAAGAAGTGGTATAATAGGACCATTTGGTTTGTTTGCTTTGGCATCAGAGGACCAGACAGAGAAAACTGTAGTGTACTTCCGTATATTTAGAGCTCCCAATAGATATGTATGCCTAATGTGCAGTGACCAGAGCAGGTCTTCATTGCGGCAGGACCTTGACAAAACCACATATGGAACTATATTTGACATAGATCCCAGTATCAAAACGATTTCCCTTAGAAGCTTGATTGATCGCTCCATTATTGAGAGTTTTGGGGAGGGAGGGAGAGTTTGCATCACCAGTAGAGTTTATCCCTCATTGGCCATAGATAAAGATGCTCATCTTTATTTATTCAACAATGGAAGCCAGAGTGTGGTGATCTCAAAACTGAATGCTTGGAGCATGAAGCAAGCCGAGTTTGGCCTTGAGGAAAACATAATTAAGCTGTAG 1551 0.4197 MYYKGVYHIFYQYNPYGATFGDMVWGHSISYDLINWTYLNNAIEPSEPYDNKGCYSGSVTILPGEKPLILYTGADDDNKHQVQCLALPRNLSDPYLREWDKYPQNPVMIQPSGVEENNFRDPSTAWQGKDGKWRVLVGAQNGDEGKAILCKSEDFVHWTVDPNPFFATDNTGVCECPDFFPVFINSTSGVDYTSVENQNMRHVLKISYLRRQHDYYFVGKYVSDQENFIPDVKYTGTSSELRMDYGKFYASKSFFDYAKNRRIVWGWVPESDTTQDDIEKGWAGLQTIPRQVWLDKTGKRLIQWPIEELEKLRDKQISITGEKLVPGSTLEVTGITASQADVEVLFELPELESAEWLDSSEVDPQLLCSEEYASRSGIIGPFGLFALASEDQTEKTVVYFRIFRAPNRYVCLMCSDQSRSSLRQDLDKTTYGTIFDIDPSIKTISLRSLIDRSIIESFGEGGRVCITSRVYPSLAIDKDAHLYLFNNGSQSVVISKLNAWSMKQAEFGLEENIIKL. 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03403 516 CDD GH32_Fruct1-like 1 294 - -
Seca8g03403 516 SMART glyco_32 1 462 IPR001362 GO:0004553|GO:0005975
Seca8g03403 516 Pfam Glycosyl hydrolases family 32 N-terminal domain 1 305 IPR013148 -
Seca8g03403 516 SUPERFAMILY Concanavalin A-like lectins/glucanases 305 504 IPR013320 -
Seca8g03403 516 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 317 502 - -
Seca8g03403 516 Gene3D Glycosyl hydrolase domain; family 43 1 316 IPR023296 -
Seca8g03403 516 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 506 - -
Seca8g03403 516 Pfam Glycosyl hydrolases family 32 C terminal 308 501 IPR013189 -
Seca8g03403 516 Gene3D - 317 502 - -
Seca8g03403 516 SUPERFAMILY Arabinanase/levansucrase/invertase 1 306 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03403 Seca-Chr8 97807253 97810716 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03403 1 507 Glycoside Hydrolase AT1G55120 54.932 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03403 - K01193 gmx:100777487 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03403 8 97807253 97810716 Seca8g03403 8 97807253 97810716 ECH