Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03401 ATGAATATCTTTGCAGAGTCACTATTACTTGTCATGCTTCTTTTTCTGCTAAACAGTGGAAATGGAATTGAAGCATCAACACATAGCATCAATTACATCAAGTACAAGATACCTGAAAAACAACCTTACCGAACTTCTTATCACTTTCAGCCCCCACAAAATTGGATGAACGCTCTTGCAGCACCGATGCATTATAAAGGTGTTTATCACCTTTTCTACCAACATAATCCTTATGCAGCAACCTTTGGCGATCAGATTGTGTGGGCTCACTCTGTATCCTATGATCTCATCAATTGGGTTCATCTGAATCATGCTATTGAACCAAGTGAGCCCTTTGACATCAAAAGTTGCTGGTCAGGCTCAGCCACTATACTCCCAGGGGAAAAGCCTGTTATTTTGTACACAGGGATTGATGATAAAAAGTATGAAGTTCAGAACTTAGCTATGCCAAAGAATCTATCAGACCCGTTCTTAAGGGAATGGGACAAACACCCTCAAAACCCTGTCATGACTCCACCAAGTGGAGTTGAAGTGAATAATTTCAGAGACCCATCAACTGCTTGGCTGGGAAAGGATGGAAAATGGAGGGTAGTCATTGGTGCTCAAAATGGTGATGAAGGGAAGGCCATTCTCTACCAAAGTGAGGATTTTGTTAATTGGACAGTGGACCCAAATCCTTTCTTTGCAACAGATAATACTGGGGTTTGTGAATGTCCTGACTTTTTTCCTGTGTACATCAATAGCACAAATGGGGTGGATACATCTGTTCAAAATCCTAGTGTTAGGCATGTTTTGAAGATAAGCTATCTAAGCACACTGCATGACTACTATTTTCTTGGTAAATATGTCTCTGATCAGGAAAACTTCATTCCTGATGTTAAATTTACAGGAACTAGTTCAGACTTAAGGTATGACTATGGTAAATTTTATGCTTCCAAGTCATTTTTTGACTATGCCAAGAACAGGAGGATATTGTGGGGTTGGGTGAATGAGTCTGACACCACACAAGATGATATTGAGAAAGGATGGGCTGGTCTACAGTCGATACCAAGGCAAGTTTGGCTTGATAAAAGTGGGAAGCAATTGGTGCAGTGGCCAATTGGAGAGGTAGAAAAACTGCGGGACAAGCAAATCAGTATAAAGGGAGAGAAACTCATCGGTGGATCAACTCTTGAAGTCTCAGGCATCACTGCATCACAGGCGGATGTAGAAGTGTTGTTTGAGCTACCTGAATTAGAAAGTGCCGAGGAGTTAGATCCAAGTGGAGTTGATCCTCAACTACTCTGTAGCCAAGAATATGCATCAAGAAGTGGCATAATAGGGCCATTTGGTTTGTTAGCTTTAGCCTCAGAAGATCTCACAGAGCAGACTGCAATCTTCTTCCAAATATATAGAGCTCCCAATAGATATGTAGGTCTAATGTGCAGTGACCAGAGCAGTTTTTTTTTCCCTACACTTCACAGGTCTTCATTGAGGCAGGACCTTGATAAAACCACATATGGGACCTTCTTTGACATTGATCCCAATCACAAAACAGTTTCACTTAGAAGCTTGATTGACCGCTCCATTATTGAGAGTTTTGGGGAGGGAGGGAGAGTTTGCATCACCAGTAGAGTTTATCCCTCGTTGGCTATAGACAAAAATGCCAATCTTTATGTTTTCAACAATGGAAGGCAGAGTGTGATGATCTCAAAACTAAATGCTTGGAGCATGAAGCAAGCCGAGATCGGCCACGAGGGAAATATAAGCTGTACCTAA 1758 0.4152 MNIFAESLLLVMLLFLLNSGNGIEASTHSINYIKYKIPEKQPYRTSYHFQPPQNWMNALAAPMHYKGVYHLFYQHNPYAATFGDQIVWAHSVSYDLINWVHLNHAIEPSEPFDIKSCWSGSATILPGEKPVILYTGIDDKKYEVQNLAMPKNLSDPFLREWDKHPQNPVMTPPSGVEVNNFRDPSTAWLGKDGKWRVVIGAQNGDEGKAILYQSEDFVNWTVDPNPFFATDNTGVCECPDFFPVYINSTNGVDTSVQNPSVRHVLKISYLSTLHDYYFLGKYVSDQENFIPDVKFTGTSSDLRYDYGKFYASKSFFDYAKNRRILWGWVNESDTTQDDIEKGWAGLQSIPRQVWLDKSGKQLVQWPIGEVEKLRDKQISIKGEKLIGGSTLEVSGITASQADVEVLFELPELESAEELDPSGVDPQLLCSQEYASRSGIIGPFGLLALASEDLTEQTAIFFQIYRAPNRYVGLMCSDQSSFFFPTLHRSSLRQDLDKTTYGTFFDIDPNHKTVSLRSLIDRSIIESFGEGGRVCITSRVYPSLAIDKNANLYVFNNGRQSVMISKLNAWSMKQAEIGHEGNISCT. 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03401 585 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 52 378 - -
Seca8g03401 585 CDD GH32_Fruct1-like 54 355 - -
Seca8g03401 585 SUPERFAMILY Arabinanase/levansucrase/invertase 40 367 IPR023296 -
Seca8g03401 585 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 378 571 - -
Seca8g03401 585 SMART glyco_32 48 531 IPR001362 GO:0004553|GO:0005975
Seca8g03401 585 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 37 576 - -
Seca8g03401 585 Pfam Glycosyl hydrolases family 32 C terminal 369 570 IPR013189 -
Seca8g03401 585 SUPERFAMILY Concanavalin A-like lectins/glucanases 366 573 IPR013320 -
Seca8g03401 585 Pfam Glycosyl hydrolases family 32 N-terminal domain 48 366 IPR013148 -
Seca8g03401 585 Gene3D - 379 571 - -
Seca8g03401 585 Gene3D Glycosyl hydrolase domain; family 43 53 378 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03401 Seca-Chr8 97751651 97754961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03401 61 576 Glycoside Hydrolase AT1G55120 56.084 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03401 - K01193 gmx:100777487 994.956