Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03363 ATGATAGGAATAGCTTACCTTGAGCATTTCGTGCACGGAAATGACACAGAATCGATGCCAAACGACGACGTCTCGGCCCTCGAAGGCACTTTCCACTTCGCCGCCACCGGCATCGCCACCAAAGACTTCGGCGGCATGAAATCCGCGAACCCTCTGGCCGTCATCCGCCCCTCCACCGCCGTCGACGTGGCTCGTGCGGTGAGAGCGGCGGGGAGAACTCCCAACCTGACGGTGGCTGCTCGAGGCAACGGCCACTCCATCAACGGCCAGGCCATGGCCGAGAAAGGGCTCGTCCTCGACATGCGCGCCATGGAGGAAGTTTTCCAGCTCCTCTGGCTCGACGGTTCCCCTTACGTCGACGTTTCGGGAGGGGCATTATGGGAAGAAGTTCTTAAACGCTGCGTTTTGCAGTTCGGTCTCGCCCCGAGGTCATGGACCGATTATCTTGGTTTAACGGTGGGAGGAACGCTCTCTAACGCTGGCGTCAGTGGCCAGTCCTTCCGTTACGGACCCCAAACGTCTAACGTAACGGAATTGGAGGTCGTTACCGGTAAAGGAGATACCTTGCTTTGCTCCGAAACCCAAAATTCAGAGCTTTTCTTTGCAGCGCTTGGTGGGCTGGGCCAGTTCGGTATCATAACCAGAGCTAGGCTCGTGCTTCAACAAGCCCCTGATATGGTGAGATGGATAAGGGTGGTTTACTCGGAATTTGAGGACTACACTGCGGATGCAGAGTGGCTGGTAACTCTCCGAGAAGGTGACGGTTTTGATTACGTGGAAGGGTTCGTTGTGGTGAACGGTGATGACCCTTGCAACGGATGGCCCACCGTGCCAATGGACCCGAACCACCAAATGTTCGACCCGGTTCATGTCCCTTCCACTGCTGGACCTGTCCTCTATTGCTTAGAACTTGCCCTTCATTACCGTCACACAGACCTCCCTTCAGATGTTGACATGGAAGTCGATAAATTGCTTGGAGGGCTACGATTCGTTGAGGGTTTGAAGTTTGAGAAGGATGTAACATACACGGAGTTTTTGCTACGTGTGAAGCGTGTTGAGGAAGATGCAAAAGCAAAGGGCATTTGGGATGCACCTCATCCATGGCTGAACCTGTTCGTGTCCAAGTCGAACATCGCTGAGTTTGATCGTGAGGTGTTCAAAAAGATCCTCAAGCATGGAGTTGGTGGTCCCATTCTAGTGTACCCGTTATTGCGAAGCAAGTGGGATAGTCGACACTCGGTAGTGGTGCCCGACAGCAACATCTTCTACATAATAGCCTTGCTCCGATTTATTCCACCACCTCCAAAGGGACCACCTACGGATCGATTGGTGGCACAAAACCATGCGATTATTCAGTTATGCTACAACAGAGGCTTTGATTTCAAGTTATATCTTCCTCACTACCAGTCACAGGAGAACTGGATGCGACACTTTGGAGATAAGTGGACTACATTCCTCCACAGAAAGGCCAATTTTGATCCTCTCGCTATTCTTGCACCTGGACAGAAAATTTTTTCCAGAAACCAACCCTTCTCTATCACATAA 1545 0.5197 MIGIAYLEHFVHGNDTESMPNDDVSALEGTFHFAATGIATKDFGGMKSANPLAVIRPSTAVDVARAVRAAGRTPNLTVAARGNGHSINGQAMAEKGLVLDMRAMEEVFQLLWLDGSPYVDVSGGALWEEVLKRCVLQFGLAPRSWTDYLGLTVGGTLSNAGVSGQSFRYGPQTSNVTELEVVTGKGDTLLCSETQNSELFFAALGGLGQFGIITRARLVLQQAPDMVRWIRVVYSEFEDYTADAEWLVTLREGDGFDYVEGFVVVNGDDPCNGWPTVPMDPNHQMFDPVHVPSTAGPVLYCLELALHYRHTDLPSDVDMEVDKLLGGLRFVEGLKFEKDVTYTEFLLRVKRVEEDAKAKGIWDAPHPWLNLFVSKSNIAEFDREVFKKILKHGVGGPILVYPLLRSKWDSRHSVVVPDSNIFYIIALLRFIPPPPKGPPTDRLVAQNHAIIQLCYNRGFDFKLYLPHYQSQENWMRHFGDKWTTFLHRKANFDPLAILAPGQKIFSRNQPFSIT. 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03363 514 SUPERFAMILY FAD-binding/transporter-associated domain-like 34 220 IPR036318 GO:0050660
Seca8g03363 514 Pfam FAD binding domain 51 191 IPR006094 GO:0050660
Seca8g03363 514 Gene3D - 39 506 IPR016167 -
Seca8g03363 514 Gene3D - 101 225 IPR016169 -
Seca8g03363 514 SUPERFAMILY FAD-linked oxidases, C-terminal domain 224 505 IPR016164 GO:0003824|GO:0050660
Seca8g03363 514 PANTHER GULONOLACTONE OXIDASE 26 506 - -
Seca8g03363 514 Gene3D - 227 464 IPR016170 -
Seca8g03363 514 ProSiteProfiles PCMH-type FAD-binding domain profile. 47 223 IPR016166 GO:0071949
Seca8g03363 514 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 224 505 IPR015345 GO:0009690|GO:0019139|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03363 Seca-Chr8 96752753 96757204 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03363 K00279 - gmx:100783374 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03363 8 96752753 96757204 Seca8g03363 8 96752753 96757204 ECH