Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03350 ATGGCTGCAACTCCTGCGGACATCAAGGAATATCCAAATTCTTATGTGTTTGTGATCGACATGCCTGGGTTGAAATCTGGGGATATAAAGGTTCAAGTGGAAGATGACAATGTGCTTGTCATAAGTGGGGAGAGGAAGAGAGAGGAAGAGAAAGAAGGGTCCAAGTATCTGAGGATGGAGAGAAGGGTTGGCAAGTTTATGCGCAAGTTTAGCCTCCCTGAGAATGCTAACACTGAGGCTATCTCTGCTATGTGCCATGATGGGGTGCTCAGTGTCACTGTGGAGAAAGTACCTCCTCCTGAGCCTAAGAAACCTAGGACTATCGAGAAAGCACAACTTAGCAGGAAAAGAAAAACAGAGGGAAAGCGTCATGGATTTGAGGATGATGGGTTTCGATTCTCCATTACTCCACGCTCTGCACAAGATGATGGACCTTTCAGACGACACTGCATTGTGAAAGACACACAATGCTCTCCCACGAAGGCAATGGCCGCAACTCCTGCGGACGTGAAGGTATATCCGAACTCTTACGTGTTCGTGATCGACATGCCATGGTTGAAAGGAAGAAGAGAAAGAATATTAGAACTTTAG 591 0.4636 MAATPADIKEYPNSYVFVIDMPGLKSGDIKVQVEDDNVLVISGERKREEEKEGSKYLRMERRVGKFMRKFSLPENANTEAISAMCHDGVLSVTVEKVPPPEPKKPRTIEKAQLSRKRKTEGKRHGFEDDGFRFSITPRSAQDDGPFRRHCIVKDTQCSPTKAMAATPADVKVYPNSYVFVIDMPWLKGRRERILEL. 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03350 196 Pfam Hsp20/alpha crystallin family 7 109 IPR002068 -
Seca8g03350 196 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 1 111 IPR002068 -
Seca8g03350 196 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 156 186 IPR031107 -
Seca8g03350 196 Gene3D - 1 109 IPR008978 -
Seca8g03350 196 SUPERFAMILY HSP20-like chaperones 2 105 IPR008978 -
Seca8g03350 196 FunFam 17.3 kDa class II heat shock protein-like 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03350 Seca-Chr8 96076767 96078995 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03350 K13993 - cave:132183725 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03350 8 96076767 96078995 Seca8g03350 8 96076767 96078995 ECH