Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03348 ATGATGATGAAACCAAATTCTGAGTGTGGAAACCTAGATGTTGATGATGGTGGAGAAACTAATGTGAATAATGGTCAGCAACTACTGCGTGACATTGAAGAAATAAGCAAAGCTCTTTACTTGAACAATAATACCCCTTTTAAGGCTTCCTTCTCCTCAGTCCATAATCGATCCAAGTCTGCTGGAAAAGCCCGTTTGTCCAAACCTCAAACTAATTTAACCCCGGGATTTCTAAGGGAGGATCTGTTGCCAAGGGACAAGAAGGTGTCTTCAGCATGGAATTGGAAGAAGCCCTTGAAAGCTTTGACCCATGTTGGTCATCAAAAGTTCAATTGTTGCTTTAATCTTCATGTCCACTCAATTGATGGGTTGCCTTTGAATTTCAATGGCATTAGTTTATGCGTGAATTGGAAAAGGAAGAGCAACATTTTGCAGACACGCTCATCAAGGGTTTTCCAGGGTGCTGCAGAGTTTGATGAAACTTTGACACATAGATGTTCTGTTTATGGTAGCCGTGCCGGGTCTAGTCACTCTGTCAAGTATGAGTCTAGGCGTTTCTTGATTTATGCTTCTATTGTTGGGGCACCTGAACATGACTTAGGGAACCATCAGGTTGATCTCACAAGGCTTTTACCTCTAACTTTAGAAGAGTTAGGGGGTGATAAAAGTTCAGGGAAATGGAGCACGAGTTTTCAGTTGGCAGGAAAGGCTGTCGGAGCTAGCCTAAATGTTAGTTTCAGTTATCAAGTAATGAAGCATGAGTTAATGGGATTTGGTGGTAATAATCTGAATGTTCTCAACCTTGTTAACTTGAAGCCAGGCAGGCCAAGCACTACAGACAATGTTGTGGGTTGTAGCCCTAGCAATAGAGACATAAAGCTTCCGCAATCTGGGAGCTTTCCACGTGAACTATATAATGAATTGGTTCTCCCTTCTCATTCAGATGATGTGAAATCCCATGAAGCATTGCTGAATTCTGGCTTGAGTATTACCAAATCAATCTCTCTCTTATACCAAAAACTTGATGAGGGGAACTTCCATAATTCAGCAAGGGAAGACTCAGAACATTTGGGACCACTTAAATCCCAAATTATTCTGAAATCAGAGTCTCCTCAAGAATCAAATCTATATGAGTCTGATGACACTGAATTTTCCGTTATTGAACAAGGAGTAGAAACGTCAGAAAGAGATTCCTTGGAACTTGATCAGACAGGAATTCAAACATTTGATGTGTCAATAGTTGAAATCATTAATGTGGATGAGATTATTAAGGATGATGACATATTTGTTGACAAGAACACAAGATGTGATTCAATGGATACCATACGTGCTAGTTGTGTGAATGGAGCTATGGCTGATGACAGCAAATATAAATGTAGTTCATGTGTCAATCAACCTTGCATGGAGATTGCAGATACTGTTCCTGAGACATCAGAGTTTCTTGGCCAAGAACACTACCTAAGTGTTAAATCAAATTATAAAGCACATAAAATGGCAAAAAAGTCACATAGCTTGGATGATATCATTGAATCTGTCACGAGTGATTTCTTAAACATGCTAGACATGGACAGGGGTTCATTTGGCTCAAGTTGTGATGGTGATCCCCAGTCTCCCAGAGAGCAGCTTTTAAGACAGTTTGAAAAAGAAGCACTAACTTCAGGTAACTTCACTTTTGATTTTGATGCAAATGAGGAGGAATTACGGGAAGATGCACTTGTACATAGCAGTGGGGATTGTGCTGTAGATTCTGATTTGTCTTTAATTATTCAAGCTGCCGAAGAGGAGTATGCAAGGGCAAATCAGTCACTAATACAGAGAAGGAAGGCCCAAGTTCTTGAAGATCTGGAGACTGACTCATTGATGCAACAATGGGGTTTAAATGAGAGGGACTTTGAAAATTCTCCGGGAACTTGGTCTGGAGGATTTGGCAGTCCAATTGAACTATCCGATGAAGAATCATCCATATTACCTTCAATTGGGGAAGGGCTTGGTTCATTTGTTCAAACTATGGGTGGAGGCTTTTTAAGGTCTATGAATCCTTCCCTATTCAGAAATTCTAAAAATTGTGGGAACCTTATCATCCAGGCTTCTAAACCAGTTGTTCTACCTGCGAAAATGGGTAATGATATATTGGAGATACTGCTGCATGTTGCATCTGCTGGAGTTGAAGAACTTTGTGATAATATCTATAAATTAATGCCTTTGCAAGATATCACTGGAAAATCCATTAAACACATAGCACAGGATTCTACAACATACAGAGGGGCTCATGGAAGTCTGGGATCATGGCAGCATGTGTTATTTAAAGAAACAGATGAAGGCATGGGTTTGGATTCCGTGGCTCTAGAAGCTATAGCTCCTATGACTATTAATAAGATCGAAGCCCTTTTAATTGAAGGGTTGAGAGTACAGTCTGGCATGTTGAATAAGGAGGCACCATCATACCTTCGTCCCTTCGAAAACAGAAGAGCCAATCTGAGAGGATTTCCCACATTAGAAAGAGTTGCTAAATTACAACCAGAAGATAGTGGAGGAATTGGCAGTGATGTTGATGGATTGATGGGTCTGTCAATAACATTGGATCAGTGGTTGAGACTGGATTCTGGCATTATTGAAGGTGATCAGAATTTGGGGCAGATATTCAAGATCCTTAAAGCAAACCATTGTAAAATCACAGAATTAGACAATGACAGGTTGAAAAAAGCCATGGATGAGGCAAAAACATTTGGCAGAAAGCATGGACTCTTGGGGAATCACACAACAGTGGCTTTTGTGATCCAGCTCAGAGATCCTCTAAGAAATTATGAACCGGTTGGTGTTCCAATGCTGGTTTTAACTCAAGTGGAAAGAGTTGAGGCCCTGCTAGATGCGACAAGTAGCAAGAATTTGGACAATACAAATATAGATAATGAAACCCCTAAGTTTAGATTTAAACCAAAGGAGATTCATCTTGCAGGTGTCCTTACCAAAGCTGAAAACAGGCAACTTTGGGGTACTGCAGCTCAGCAACAGTCCGGGTTCCGTTGGTTGCTTGCCAATGGCATGGGCAGTACTGTCAAACATTCATCTTCAAAATCAAAGTCAATTGTTAGATCATCCCCACTTTTTACCAAGAAGTTGCTGAATCAGGATATCCTCTGGAGCATTTCTTATGTTAATAATAATAACATGAGGACTAATGGTAAAGAGCTAGCAGCTGAAAATGTACACATTCGGAACCCTGATATTATCTTCCTGAAATGA 3243 0.4033 MMMKPNSECGNLDVDDGGETNVNNGQQLLRDIEEISKALYLNNNTPFKASFSSVHNRSKSAGKARLSKPQTNLTPGFLREDLLPRDKKVSSAWNWKKPLKALTHVGHQKFNCCFNLHVHSIDGLPLNFNGISLCVNWKRKSNILQTRSSRVFQGAAEFDETLTHRCSVYGSRAGSSHSVKYESRRFLIYASIVGAPEHDLGNHQVDLTRLLPLTLEELGGDKSSGKWSTSFQLAGKAVGASLNVSFSYQVMKHELMGFGGNNLNVLNLVNLKPGRPSTTDNVVGCSPSNRDIKLPQSGSFPRELYNELVLPSHSDDVKSHEALLNSGLSITKSISLLYQKLDEGNFHNSAREDSEHLGPLKSQIILKSESPQESNLYESDDTEFSVIEQGVETSERDSLELDQTGIQTFDVSIVEIINVDEIIKDDDIFVDKNTRCDSMDTIRASCVNGAMADDSKYKCSSCVNQPCMEIADTVPETSEFLGQEHYLSVKSNYKAHKMAKKSHSLDDIIESVTSDFLNMLDMDRGSFGSSCDGDPQSPREQLLRQFEKEALTSGNFTFDFDANEEELREDALVHSSGDCAVDSDLSLIIQAAEEEYARANQSLIQRRKAQVLEDLETDSLMQQWGLNERDFENSPGTWSGGFGSPIELSDEESSILPSIGEGLGSFVQTMGGGFLRSMNPSLFRNSKNCGNLIIQASKPVVLPAKMGNDILEILLHVASAGVEELCDNIYKLMPLQDITGKSIKHIAQDSTTYRGAHGSLGSWQHVLFKETDEGMGLDSVALEAIAPMTINKIEALLIEGLRVQSGMLNKEAPSYLRPFENRRANLRGFPTLERVAKLQPEDSGGIGSDVDGLMGLSITLDQWLRLDSGIIEGDQNLGQIFKILKANHCKITELDNDRLKKAMDEAKTFGRKHGLLGNHTTVAFVIQLRDPLRNYEPVGVPMLVLTQVERVEALLDATSSKNLDNTNIDNETPKFRFKPKEIHLAGVLTKAENRQLWGTAAQQQSGFRWLLANGMGSTVKHSSSKSKSIVRSSPLFTKKLLNQDILWSISYVNNNNMRTNGKELAAENVHIRNPDIIFLK. 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03348 1080 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 20 1079 IPR039614 -
Seca8g03348 1080 MobiDBLite consensus disorder prediction 1 23 - -
Seca8g03348 1080 ProSiteProfiles C2 NT-type domain profile. 102 250 IPR019448 -
Seca8g03348 1080 Coils Coil 589 609 - -
Seca8g03348 1080 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 107 251 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03348 Seca-Chr8 96018866 96023250 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03348 - - gmx:102659940 1464.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03348 8 96018866 96023250 Seca8g03348 8 96018866 96023250 ECH