Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03337 ATGGCGACGTCCGTCGTAGTCGGCGGCACTCTAACGGCGCACAATCGCCAGATTCTTACCGCGGTGAACGCCGGAGCGTCGAGCCTCTCGTTGGCTGGGTCCAGCTTCATTGTGCTCTGCTACCTCCTCTTCAAGGAGCTCCGCAAGTTTTCATTCAAGCTCGTTTTCTACCTCGCCCTCTCCGATATGCTTTGCAGTTTCTTCAGCATAATAGGGGACCCATCCAAAGGTTTCTTTTGTTATGCACAGGGCTATAGCACACATTTCTTTTGTGTGGCATCTTTCCTATGGACTACAACAATTGCTTTTACCCTGCACCGCACTGTTGTAAAACACAAGACGGATGTTGAAGATTTGGAGGCCATGTTTCACTTGTATGTCTGGGGTACATCCCTTGTTATGACAGTTATGCGCTCCTTTGGTAATGATCATAGACATTTTGGTGCTTGGTGTTGGACTCAAACAGGCCGCACAGGAAAGGCAAGTGGAATTAGGAGTACAGGGTACATATTGCAGGCAATTCATTTTATTACATTTTACATGCCACTTTGGGGTGCAATCCTATATAATGGGTTTACATACTTACAAGTAATACGCATGCTGAATAATGCAACCCGTATGGCAGTTGGCATGTCAGGTCAAGCTTATGTCTCAGACACAAGAGATAACATGAGGGCTCTGAATCGGTGGGGATACTATCCACTAATTCTAATAGGATCATGGGCTTTTGGCACTATTAACCGTATTCATGATTTCTTTGAACCCAGCCATAAGATCTTTTGGCTCTCACTTCTTGATGTTGGAACAGCTGCTCTTATGGGTCTCTTTAATTCAATTGCATATGGCCTCAATTCTTCTGTTCGTCGAGCAATTTGTGAAAGACTGGACAAGTTCTGGCCTGAGAGACTGTACAGATGGCTCCCTAACAATTTTAAGTACAAGAACCTACAGCAAGAAAGTGAACTAGTTTCATTCAAAATTGAAGATCAACGATAG 996 0.4448 MATSVVVGGTLTAHNRQILTAVNAGASSLSLAGSSFIVLCYLLFKELRKFSFKLVFYLALSDMLCSFFSIIGDPSKGFFCYAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLEAMFHLYVWGTSLVMTVMRSFGNDHRHFGAWCWTQTGRTGKASGIRSTGYILQAIHFITFYMPLWGAILYNGFTYLQVIRMLNNATRMAVGMSGQAYVSDTRDNMRALNRWGYYPLILIGSWAFGTINRIHDFFEPSHKIFWLSLLDVGTAALMGLFNSIAYGLNSSVRRAICERLDKFWPERLYRWLPNNFKYKNLQQESELVSFKIEDQR. 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03337 331 PRINTS GCR1-cAMP receptor family signature 233 251 IPR022343 -
Seca8g03337 331 PRINTS GCR1-cAMP receptor family signature 80 98 IPR022343 -
Seca8g03337 331 PRINTS GCR1-cAMP receptor family signature 49 64 IPR022343 -
Seca8g03337 331 PRINTS GCR1-cAMP receptor family signature 30 48 IPR022343 -
Seca8g03337 331 PRINTS GCR1-cAMP receptor family signature 265 284 IPR022343 -
Seca8g03337 331 Gene3D - 10 306 - -
Seca8g03337 331 SUPERFAMILY Family A G protein-coupled receptor-like 15 299 - -
Seca8g03337 331 Pfam Slime mold cyclic AMP receptor 24 281 - -
Seca8g03337 331 PRINTS Putative plant GPCR, GCR1, signature 82 95 IPR022340 -
Seca8g03337 331 PRINTS Putative plant GPCR, GCR1, signature 36 50 IPR022340 -
Seca8g03337 331 PRINTS Putative plant GPCR, GCR1, signature 275 291 IPR022340 -
Seca8g03337 331 PRINTS Putative plant GPCR, GCR1, signature 19 34 IPR022340 -
Seca8g03337 331 PRINTS Putative plant GPCR, GCR1, signature 227 248 IPR022340 -
Seca8g03337 331 PRINTS Putative plant GPCR, GCR1, signature 257 274 IPR022340 -
Seca8g03337 331 PRINTS Putative plant GPCR, GCR1, signature 52 74 IPR022340 -
Seca8g03337 331 PRINTS Putative plant GPCR, GCR1, signature 97 115 IPR022340 -
Seca8g03337 331 PRINTS Putative plant GPCR, GCR1, signature 120 135 IPR022340 -
Seca8g03337 331 PANTHER G PROTEIN-COUPLED RECEPTOR 157-RELATED 10 289 - -
Seca8g03337 331 ProSiteProfiles G-protein coupled receptors family 2 profile 2. 19 285 IPR017981 GO:0004888|GO:0007166|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03337 Seca-Chr8 95685861 95706277 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03337 K22987 - gmx:100794547 603.594