Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03256 ATGCTTCCATTGTTTGTTGATTCGGGTGATGATGGAAACTATGCACAAACTGCAGCCGGTGATCTTACATTATTGCAGGCCATCTCTAGAAGGATCCATTATGGAAAGTTTGTAGCTGAGGTGAAATTCAGGGATTCTCCCCAAGACTATGAGCCTTTAATTCGTGCTAAGGATAGAGAAGGGTTGATGAAATTGTTGACATTTGAGAGTGTTGAAGAGATGGTGAGAAAGAGGGTTGAAAAGAAGGCAATGGTGTTTGGGCAGGACATAAGCCTCAATAATGATGGTGACAACAATGGAAAACACAAGTTTGACCCATCAGTGGCTTCTCGCTTGTACCAAAAATGGATAATACCTCTTACCAAGGAGGTTCAGGTCGAGTACCTATTGCGCCGTCTAGATTAA 405 0.4247 MLPLFVDSGDDGNYAQTAAGDLTLLQAISRRIHYGKFVAEVKFRDSPQDYEPLIRAKDREGLMKLLTFESVEEMVRKRVEKKAMVFGQDISLNNDGDNNGKHKFDPSVASRLYQKWIIPLTKEVQVEYLLRRLD. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03256 134 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 1 134 IPR037039 GO:0004106|GO:0009073
Seca8g03256 134 PANTHER CHORISMATE MUTASE 1 134 IPR008238 GO:0004106|GO:0009073
Seca8g03256 134 SUPERFAMILY Chorismate mutase II 1 134 IPR036263 GO:0046417
Seca8g03256 134 ProSiteProfiles Chorismate mutase domain profile. 1 134 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03256 Seca-Chr8 93308984 93311319 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03256 K01850 - gmx:100791341 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03256 8 93308984 93311319 Seca8g03256 8 93308984 93311319 ECH
Seca8g03256 8 93308984 93311319 Seca4g01078 4 17429321 17431688 PCT