Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03255 ATGCAGAGATTCAAAACTCTGCTACCACAAAGTAGGCTCTCATTTCGCAAACTCTGCTCCCATCGCCGAGCTTTCACTGCTCAACCCAATTACGTGGAGCGCGATGACGATGATAATTCCCAGCAACAGATTTTAGTTGAAGGAAGAGTGAAATCTCGTGCAGCTATTCTCAACAGGCCATCTTCTCTGAACGCGCTCACCACTTCAATGGTTGCTCGGTTGAAGAGACTGTATGATTCATGGGAAGAAAACTCGGACATTGGCTTTGTTTTGATGAAGGGTAGTGGCAAAGCTTTCTGTTCTGGTGCAGATGTTGTTAGGCTGTATCACTCACTCAATGAAGGAAATGCTGAAGAGGCCGAACAGTTTTTCAAAACATTATATTCATTTGTATATCTTCAAGGGACATATCTTAAACCGCATGTTGCTATTTTGGATGGAATGACAATGGGATGTGGATCTGGAATTTCTCTTCCAGGGATGTTCCGTGTGGCAACTGATAAAACTATTTTTTCTCACCCAGAAGCTCAGATAGGCTTCCACCCTGATGCAGGAGCTTCTTATCTTTTGTCTCGTCTACCTGGCTACTTAGGGGAATACTTGGCCCTTACAGGAGATAAGCTTAATGGTGTGGAAATGGTTGCACTCCGCCTTGCCACTCATTATTCACTAAACGCAAGGCTTGCTTGGCTTGAAGAACGCCTTGGTAAATTAGTCACAGATGATCCGTCTGTTGTCGAGGCATCTCTTGCACAGTATGGTGATCTTGTTTATCCAGACAGAAGCAGTGTCCTTTACAGGATTGATACTATTGATAGATGTTTCAGTCACGATACAGTGGAGGAAATTATTGAAGCTTTGGAGAAGGAGGCAGCTGAGTCTTACGACCAATGGTGTTTGACAACTCTCAGGAGAATAAGAGAAGCCTCCCCATTGAGTTTGAAAGTTATTTTACGATCTATACGTGAAGGTAGATTTGAAACTCTTGATCAATGTCTTGTTCGTGAGTACCGTGTTTCCCTTCGTGGAATTTCCAAGAATGTCTCCTCTGACTTCTTTGAGGTAATGATTTCTTTGTATTTTTTCGTAAAGAACTACAATTTTTTTTATGATTTTCACTACTTGTTTATGTAG 1134 0.4206 MQRFKTLLPQSRLSFRKLCSHRRAFTAQPNYVERDDDDNSQQQILVEGRVKSRAAILNRPSSLNALTTSMVARLKRLYDSWEENSDIGFVLMKGSGKAFCSGADVVRLYHSLNEGNAEEAEQFFKTLYSFVYLQGTYLKPHVAILDGMTMGCGSGISLPGMFRVATDKTIFSHPEAQIGFHPDAGASYLLSRLPGYLGEYLALTGDKLNGVEMVALRLATHYSLNARLAWLEERLGKLVTDDPSVVEASLAQYGDLVYPDRSSVLYRIDTIDRCFSHDTVEEIIEALEKEAAESYDQWCLTTLRRIREASPLSLKVILRSIREGRFETLDQCLVREYRVSLRGISKNVSSDFFEVMISLYFFVKNYNFFYDFHYLFM. 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03255 377 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 38 355 IPR032259 GO:0003860
Seca8g03255 377 Coils Coil 277 297 - -
Seca8g03255 377 Pfam Enoyl-CoA hydratase/isomerase 54 354 IPR045004 -
Seca8g03255 377 Gene3D - 38 362 - -
Seca8g03255 377 FunFam Probable 3-hydroxyisobutyryl-CoA hydrolase 2 38 364 - -
Seca8g03255 377 CDD crotonase-like 57 221 - -
Seca8g03255 377 SUPERFAMILY ClpP/crotonase 56 344 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03255 Seca-Chr8 93281417 93290946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03255 1 354 Acyl Lipid Metabolism Gene Families AT4G31810 69.859 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03255 K05605 - gmx:100808892 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03255 8 93281417 93290946 Seca8g03255 8 93281417 93290946 ECH