Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03242 ATGGCTTCTATGGCTTTCTCTACCACTTTCTTCACTCCTCTGCATGATTTCAGTCAAGGCAGAACAAACCCAACCCCTTCACCTTCTTTGCCTTTCACCATCAAATCCTCCTTTGCTTCCTCCAACTCAGCCTTTCTTCAACGTGGCTTTTCTCTTCAAACCTCCTCCAATTTTCCCAGGCTTCTTTTCAAGCCTCGCTCTTTCTCAGTCCATGCAAGAGCCGCCACAGAGAAAACCATTTATGATTTCACTGTCAAGGATATTGATAAGAAGGATGTTCCTCTTAACAAATTCAAGGGGAAGGTTCTCTTGATCGTCAATGTTGCTTCACGATGTGGTTTGACATCATCGAACTACTCGGAACTGTCACGCTTATATGAAAAGTATAAAAATAAAGGTTTGGAGGTTCTAGCTTTCCCCTGCAATCAATTTGGTATGCAGGAGCCTGGAACAAATCAAGAAATTAAGCAGTTTGCTTGTACTCGCTTTAAAGCAGAATTTCCAATTTTTGACAAGGTTGATGTAAATGGTCCATTTACAGCTCCAGTATACCAGTTTCTGAAATCAAGTGCTGGAGGCTTTCTGGGCGATCTTATCAAGTGGAATTTCGAGAAATTCTTGATTGATAAAAATGGTAAAGTTGTTGAAAGATACCCGCCGACAACCTCACCTTTCCAAATTGAGGTATGTTAA 693 0.4113 MASMAFSTTFFTPLHDFSQGRTNPTPSPSLPFTIKSSFASSNSAFLQRGFSLQTSSNFPRLLFKPRSFSVHARAATEKTIYDFTVKDIDKKDVPLNKFKGKVLLIVNVASRCGLTSSNYSELSRLYEKYKNKGLEVLAFPCNQFGMQEPGTNQEIKQFACTRFKAEFPIFDKVDVNGPFTAPVYQFLKSSAGGFLGDLIKWNFEKFLIDKNGKVVERYPPTTSPFQIEVC. 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03242 230 Gene3D Glutaredoxin 66 230 - -
Seca8g03242 230 ProSiteProfiles Thioredoxin domain profile. 74 230 IPR013766 -
Seca8g03242 230 ProSitePatterns Glutathione peroxidases signature 2. 137 144 IPR029760 -
Seca8g03242 230 CDD GSH_Peroxidase 79 228 IPR000889 GO:0004602|GO:0006979
Seca8g03242 230 SUPERFAMILY Thioredoxin-like 79 228 IPR036249 -
Seca8g03242 230 PANTHER GLUTATHIONE PEROXIDASE 72 228 IPR000889 GO:0004602|GO:0006979
Seca8g03242 230 PRINTS Glutathione peroxidase family signature 134 150 IPR000889 GO:0004602|GO:0006979
Seca8g03242 230 PRINTS Glutathione peroxidase family signature 98 115 IPR000889 GO:0004602|GO:0006979
Seca8g03242 230 PRINTS Glutathione peroxidase family signature 199 208 IPR000889 GO:0004602|GO:0006979
Seca8g03242 230 ProSiteProfiles Glutathione peroxidase profile. 70 230 IPR000889 GO:0004602|GO:0006979
Seca8g03242 230 ProSitePatterns Glutathione peroxidases active site. 100 115 IPR029759 -
Seca8g03242 230 FunFam Glutathione peroxidase 71 230 - -
Seca8g03242 230 Pfam Glutathione peroxidase 80 188 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03242 Seca-Chr8 92966273 92971142 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03242 K00432 - gmx:100305775 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03242 8 92966273 92971142 Seca8g03242 8 92966273 92971142 ECH