Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03240 ATGTCTCCCCCAAACTCAGGTACCACCACTACAACAACAAAGAAAACCAAGAACCCACTGTCAATCCTGACAGAGCCGGTGGAATGGCTAAGAATGCTGACGTGGCAGCTGAACCCAACCTTCATAGCTGGAGTTTTCCTGATATATGGGCTGGGCCAAGGGTTCACGGGCTCGATGTTCAAAGTTGTAGCGGATTACTACTGGAAGGACGTTCAAAAGTTGCAACCCTCAACGGTGCAGCTCTATGTGGGCCTATACTTCATCCCATGGGTCCTCAAACCCTTATGGGGCATCCTCACCGACACGTTTCCCGTCCGGGGATACCGCCGCCGTCCCTACTTTGTCATTGCTGGCGTCGTTGGCACCTTCTCCGCCGCCATCGTCGCGCTCTCACCAAACCTCGCCGCTGCCGCTGCCGTCCTCTGTTTCATCGGCGTCTCCGCTTCACTCGCTATTGCTGACGTCACCATCGACGCGTGCATCGCAAGGAACAGCATCGAGATCCCCTCGCTGGCGCCGGATTTGCAGAGCCTCTGCGGATTCTGCTCCAGTTTCGGGGCTCTCGTTGGGTACCTTGGTAGTGGCTTCTTTGTTCATCATCTTGGCCCTCAGGGGTCGCTCGGTCTTATGGTACTTTTTCCTGCTTTGACAATTGTGCTGGGTCTTGTGATTTATGAAAACAGAAACAGTGGCTTGCATAATGAAAAGAAGCAGAGTGTGGTAGAGAGTGTAGGAATGACAATCAGAAACATGCACCAAACAATGATGTACCCTCAAGTGTGGAAGCCTTCTCTTTATATTTTCCTTGCCCTGGCTCTTAATGTAACCACTCACGAAGGCCACTTTTACTGGTACACAGATTCAAAAGCTGGTCCTGCATTCTCTCAGGAGTTTGTTGGGGTGATCTATGCAATTGGTGCAGTGGCTTCAATAATTGGGGTATTAATCTACCATAAGGCTCTAAAAGACTTTGCATTTAGAAACCTACTATTCTATGCACAACTCCTATATGCTATATCTGGTGTTCTGGACCTAATCTTCATCCTCCGTTGGAATTTGATCATTGGAATTCCTGATTACTTCTTTGTTGTCATTGAAGAAAGTGCTACAAGAATCTCAAGCAAAATCAGATGGATGCCCATGATGGTACTGAGTACCCAGCTCTGCCCTCTAGGCATTGAGGGCACATTTTTCGCCCTCTTAATGTGCATTGATAGCATTGGCGCCCTCATATCCAGATGGGGCGGAGGGTTGCTTCTTCGTCTCCTTCATGTCACTAGGACTGACTTTACAAACCTATGGTTGGCTGTTCTTATGAGGGACTTGCTTAGATTTGCTACACTTGCTTTAGTTTTTCTTGTCCCTAAGGCAGGTCAGTATGAGGGACTGCTTCCTTCTGAGGTTTCTGAAAAGAATAAGATTGATAACGTAGATGAAGAGACCTTGGAGCTTGTCCCTATCAGTGGCAAAGGTGAAGTTTAG 1482 0.4825 MSPPNSGTTTTTTKKTKNPLSILTEPVEWLRMLTWQLNPTFIAGVFLIYGLGQGFTGSMFKVVADYYWKDVQKLQPSTVQLYVGLYFIPWVLKPLWGILTDTFPVRGYRRRPYFVIAGVVGTFSAAIVALSPNLAAAAAVLCFIGVSASLAIADVTIDACIARNSIEIPSLAPDLQSLCGFCSSFGALVGYLGSGFFVHHLGPQGSLGLMVLFPALTIVLGLVIYENRNSGLHNEKKQSVVESVGMTIRNMHQTMMYPQVWKPSLYIFLALALNVTTHEGHFYWYTDSKAGPAFSQEFVGVIYAIGAVASIIGVLIYHKALKDFAFRNLLFYAQLLYAISGVLDLIFILRWNLIIGIPDYFFVVIEESATRISSKIRWMPMMVLSTQLCPLGIEGTFFALLMCIDSIGALISRWGGGLLLRLLHVTRTDFTNLWLAVLMRDLLRFATLALVFLVPKAGQYEGLLPSEVSEKNKIDNVDEETLELVPISGKGEV. 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03240 493 Pfam BT1 family 53 229 IPR039309 -
Seca8g03240 493 Pfam BT1 family 263 459 IPR039309 -
Seca8g03240 493 Gene3D MFS general substrate transporter like domains 37 454 IPR036259 -
Seca8g03240 493 NCBIfam folate/biopterin family MFS transporter 26 457 IPR004324 GO:0016020
Seca8g03240 493 CDD MFS_FBT 44 452 - -
Seca8g03240 493 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 25 467 IPR039309 -
Seca8g03240 493 SUPERFAMILY MFS general substrate transporter 45 439 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03240 Seca-Chr8 92843468 92847973 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03240 - - gmx:100806186 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03240 8 92843468 92847973 Seca8g03240 8 92843468 92847973 ECH