Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03188 ATGTCGATATCTGTAGATGGCGAAGCTGCGTCGTTTCGGGCTTCTGAAGCTCAGAATAATCTTCGAAGAATTCTTGAATCATGCTCTAAATTGGCTGAAGCTAGAGACTTCCATGAGTCTGAAAACACCATCTCAGAGCTTGTCAAATTCCTTGATTCTTTGTTGGATGATGCTCTGTCAGAACCAGAAAATGAACATGCGGGGAACAATGCATTTGAAGCTCTGTCCGAGATCCATCAATACATCTGTTCTCCTTCTCTTGACCAGGAAGTTGTTGATGCTCTTTCCTTTGAACTGCCAAAGGCTGTTTCGAAGTTTCCAGGCATTTCGAGTAGATTATTGGACATGGCAATTAGCATCATCAATCAGTTTATAGTGAAATGTGGTCCAAGGGATATGCTTTCAATTCTCTGTAATGCACTAGGTTACTCAAGTAAGGTGACCAAGGCTGCCAGTTACATTGTCCCTCCTTTATCAGGGCTCTCACAGGTCTTTATCTCCATTCAGAGGCGTCAATTTGAGCAAGCAAAAGAAGCCATTCCTATGATTCTTAATGTATTGAAGGCTGTGACTTTGGAGTCAGATGAAACAGAACAAACAGAACTTGAGAATGTATTTGCCAGAGCTGTTGAGATTGCAAATTCTATATCTGAAGTTTGCGACAAGTTGGAGAATGTTGCAAAGGATAAGCTTCGAGCTCTTCTCGGTCTATATGTCCTACAATGCATGGTAGATACTCTGTACTGA 747 0.4163 MSISVDGEAASFRASEAQNNLRRILESCSKLAEARDFHESENTISELVKFLDSLLDDALSEPENEHAGNNAFEALSEIHQYICSPSLDQEVVDALSFELPKAVSKFPGISSRLLDMAISIINQFIVKCGPRDMLSILCNALGYSSKVTKAASYIVPPLSGLSQVFISIQRRQFEQAKEAIPMILNVLKAVTLESDETEQTELENVFARAVEIANSISEVCDKLENVAKDKLRALLGLYVLQCMVDTLY. 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03188 248 Pfam Uncharacterised protein family, YAP/Alf4/glomulin 46 200 IPR013877 -
Seca8g03188 248 Gene3D - 2 245 IPR011989 -
Seca8g03188 248 PANTHER GLOMULIN 17 243 IPR019516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03188 Seca-Chr8 90975955 90991655 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03188 K23345 - gmx:100817784 357.836