Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03084 ATGGTCACCACAGTAAGTATTATATGCAAAAGAACTGTGGTGAGCACCAAGCCTGTTCAACCAGGAAAGTCCTTTCCCTTATCTGTTTTGGATCGTTACATGGAGAACAACCACATTAGGATGGTGTATTATTACCAATCTTTAGGAGAGGGAGAACTTGGAGAACTGACCAAGAAATTTAGAGAGACCTTGTCACATATGCTTACCCATTTCCCCATAGTGACTGGACGGTTGATAAGAGATGACAAAGGACATTGGAAGGTCAAGTGCAATGATGCTGGCGTCAGAATGGTGGAGGCAAAAGCCAAAGGGAGTGTGGAGGATTGGCTAAGAAGTGTGGATAGGGAAAAGGAACTCAAGCTTGTGTATTGGGAGGACATGCTTCACAAGTCTTATTATTGGTCCACTTTTTATGTCCAGCAGCTGACTGAATTTGAAGAAGGTGGATTAGCAATTGGCCTAAGCTGCGTTCATCTCTTGTCAGATTCCACTTGTGCAACCAGATTCATCAAGGCTTGGGCTGACATTTCATTGGGCAACAAAATGACTGTTCCTCCAATCTGCCACCCTTTACCTCCTCGAAGACCGGTAAACAGAAAGCCCAATCACCACCCATACACTGACTTAATAGATCACTATAAATCCTCAATTGAGAAGCCAATTTCTACCAAGGAAGAAAGGTACACTACCATTTCCCTTTGCTTCTCAGGCCCCATGGTTCAGGCTTGCATCTCCAAGGCCCAACCCATTGGTCCATCCGGCCCAACACCAACACCCTTTGAGGCACTAGCAGGATTGTTTTGGGTCACACTGAGCAAAATCAAAGGACTAAGAAATGGGCTTGTTGACATGTCTATTTGTTTGGATGTAAGGAAAGTCTTGGGCTTAGACTATGGATTCTTTGGGAACTGCATGCTATATAATAAGGTTCATGCTGAAGGAAATTTAGGAGAGAACAAATTTCCACAAGCTATTAAGGCCATAAGGGATGTTGTGGCTAAAATGGACACCGAGGGAATAATGGATCTAATCGAGTGGTTAGAAAATAATGATATAAATTCACCTACAATGATGAACGGTCATGATCTGGTCTGTGCTAGCTTAGAGGGTGTGGACCCTTATTTAGCTGTGTTCCAAGATAAATTCAAACCAATTCGTGTTTCCTATTACATAGAGCCAGTTTTGGGAGAAGGGCAGGTTTTGATTTTCCAAGCACCACCACAGGAGGGACCCTTAAGCAGGGTGGTCATGGTAACGCTCAAAGAAAAGGAGGCCATTAAGCTTTGTGAAGATGATCTTATTTCACAATTCTCTCCCACCATCTTGATGTAA 1332 0.4332 MVTTVSIICKRTVVSTKPVQPGKSFPLSVLDRYMENNHIRMVYYYQSLGEGELGELTKKFRETLSHMLTHFPIVTGRLIRDDKGHWKVKCNDAGVRMVEAKAKGSVEDWLRSVDREKELKLVYWEDMLHKSYYWSTFYVQQLTEFEEGGLAIGLSCVHLLSDSTCATRFIKAWADISLGNKMTVPPICHPLPPRRPVNRKPNHHPYTDLIDHYKSSIEKPISTKEERYTTISLCFSGPMVQACISKAQPIGPSGPTPTPFEALAGLFWVTLSKIKGLRNGLVDMSICLDVRKVLGLDYGFFGNCMLYNKVHAEGNLGENKFPQAIKAIRDVVAKMDTEGIMDLIEWLENNDINSPTMMNGHDLVCASLEGVDPYLAVFQDKFKPIRVSYYIEPVLGEGQVLIFQAPPQEGPLSRVVMVTLKEKEAIKLCEDDLISQFSPTILM. 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03084 443 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 17 423 - -
Seca8g03084 443 Pfam Transferase family 5 360 - -
Seca8g03084 443 Gene3D - 210 430 IPR023213 -
Seca8g03084 443 Gene3D - 1 208 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03084 Seca-Chr8 87602906 87605384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g03084 12 424 Acyl Lipid Metabolism Gene Families AT4G13840 26.415 4.35e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03084 - - gmx:100804090 671.003