Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g03079 ATGGGTTCTTGCAAAGAACAAGAAAAAGAGGAAGGGAAGTGCGTGTGGGTTCATGGACCTATCATTGTAGGTGCTGGACCCTCAGGGATAGCAGTTGCTGCTTGTCTCTCTGAACATGGAGTACCATGTGTGATTCTTGAGAGGAGTGATTGCATAGCTTCTCTGTGGCAAAACAGAACCTATGACCGTCTCAAACTACACCTTCCCAAAGAGTTTTGTGAACTTCCTTTGATGGGTTTCCCTCACACTTTCCCAAAGTACCCCACAAAGTACCAGTTCATCTCTTACATGGAGTCCTATGCATCACACTTCTCCATTCACCCCAGGTTCAACCAAACTGTTATGAGTGCAGGGTTTGATCCAAGTTCTGAAATTTGGGTGGTTAGAACTCAAGATTGTGAGTACATTTCCCCTTGGCTTGTGGTTGCTACAGGCGAGAATGCTGAGCCTGTCATTCCCAAAATTCCTGGGATGGACTTGTTTCATGGTCCTATTGTTCACACCAGTGTGTATAAAACTGGTTCTGACTACAAAAACCAAAAGGTTTTGGTCATTGGTTGTGGCAATTCTGGAATGGAAGTTAGCTTGGACCTTTGTAGGCACAATGCCATTCCACACATGGTTGCAAGAAATACAGTACATGTTCTTCCTAGGGAGATGTTTGGCTTCTCAACATTTGGAGTAGCTATGGCATTGTATAAATGGCTTCCAATAAAATTAGTAGACAAGTTCCTCTTGCTGCTAACTAGCTTCATTTTGGGCAACACCAATCACTATGGAATCAAGAGGCCAAAAACAGGACCAATAGAGCTTAAACTTGCAACAGGGAAAACCCCTGTTCTTGATGTGGGTCAAGTAGCACAAATAAAATCTGGCAACATAAAGGTTGTGGAAGGTGTGAAGGAGATAACAAGAAGTGGTGCCAAATTTTTGAATGGACAAGAAAAGGAATTCGATGCTATAATCTTGGCAACAGGATACAAGAGCAATGTGCCTACTTGGCTCAAGAATTGTGATTTTTTCACCAAAGATGGAATGCCAAAAACACCCTTTCCTGATGGGTGGAAAGGAGAGCATGGATTGTATACGGTGGGTTTCACAAGGAGGGGTCTTCAAGGAACGTCATGCGATGCTGTTAAAATAGCTGAAGACATAGCTGGGCAGTGGAGAACAGTGAAGGACAAGAGTTATTGTGATTCACATATCATCCTACTCAATAATTCATAG 1227 0.4295 MGSCKEQEKEEGKCVWVHGPIIVGAGPSGIAVAACLSEHGVPCVILERSDCIASLWQNRTYDRLKLHLPKEFCELPLMGFPHTFPKYPTKYQFISYMESYASHFSIHPRFNQTVMSAGFDPSSEIWVVRTQDCEYISPWLVVATGENAEPVIPKIPGMDLFHGPIVHTSVYKTGSDYKNQKVLVIGCGNSGMEVSLDLCRHNAIPHMVARNTVHVLPREMFGFSTFGVAMALYKWLPIKLVDKFLLLLTSFILGNTNHYGIKRPKTGPIELKLATGKTPVLDVGQVAQIKSGNIKVVEGVKEITRSGAKFLNGQEKEFDAIILATGYKSNVPTWLKNCDFFTKDGMPKTPFPDGWKGEHGLYTVGFTRRGLQGTSCDAVKIAEDIAGQWRTVKDKSYCDSHIILLNNS. 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g03079 408 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 17 390 - -
Seca8g03079 408 PRINTS Pyridine nucleotide disulphide reductase class-II signature 19 41 - -
Seca8g03079 408 PRINTS Pyridine nucleotide disulphide reductase class-II signature 177 201 - -
Seca8g03079 408 PRINTS Pyridine nucleotide disulphide reductase class-II signature 138 146 - -
Seca8g03079 408 Pfam Pyridine nucleotide-disulphide oxidoreductase 21 212 - -
Seca8g03079 408 SUPERFAMILY FAD/NAD(P)-binding domain 150 327 IPR036188 -
Seca8g03079 408 SUPERFAMILY FAD/NAD(P)-binding domain 21 218 IPR036188 -
Seca8g03079 408 Gene3D - 19 391 IPR036188 -
Seca8g03079 408 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Seca8g03079 408 PRINTS FAD-dependent pyridine nucleotide reductase signature 20 39 - -
Seca8g03079 408 PRINTS FAD-dependent pyridine nucleotide reductase signature 181 199 - -
Seca8g03079 408 FunFam Flavin-containing monooxygenase 20 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g03079 Seca-Chr8 87053774 87056582 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g03079 K11816 - gmx:100798781 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g03079 8 87053774 87056582 Seca8g03079 8 87053774 87056582 ECH
Seca8g03079 8 87053774 87056582 Seca8g03079 8 87053774 87056582 PCT