Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02793 ATGTTGTATTTTATGCATTATAGATACCTATATGAGCTAGATCAACACCTTGATCGCTTTTTAAGGTCAGCATCTATGTCTAAAATAGATCCCCCATTTGATCGTGAAAGCATACGAAGAATACTAATACAAACTGTAAGTGCTTCCAACTGTAAAAAAGGATCACTAAGATATTGGCTCTCAGCAGGACCTGGTGATTTTCAGTTATCCCCCTCTGGCTGCCACCAGTCAGGTCTTTATGCAATTGTAATACAGGACCTGTCCTTGGCACCGCATAAGTCCAGGGGAGTTAAAGTCATTACTTCATCTATCCCCATTAAACATCCCCAGTTTGCAATCACTAAGAGTGTGAACTACCTTCCAAATGTGCTGTCAAAAATGGAAGCTGAGGAAGCTGGTGCTTTTGCAGGCATTTGGCTTGATAGTGAAGGTTTTGTTGCGGAAGGGCCTAATATGAATGTGGCTTTTGTCACTAAAGAGAAGGAACTTATAATGCCTCAATTTGACAAAATTCTAAGTGGCTGCACAGCTAAGAGAGTTTTAACCCTTGCTGAGTGTTTGTTGAGGGAGGGTAAGCTTCAGGCGATAAGGACGAAAAATGTGACCATCGAGGAAGGGAAGATGGCAGATGAAATGATGCTTATTGGCAGTGGAGTTCTTGTTTGCCCTGTAGTGCAGTGGGATAAGCAGGTTATTGGAGATGGCAAAGAAGGCCCCATAACCCAGGCTCTCTTAAATCTAGTTGTTCAAGACATGAAATCAGGCCCCCCTACTGTTCGTATACCTGTTCCTTATTGA 798 0.4248 MLYFMHYRYLYELDQHLDRFLRSASMSKIDPPFDRESIRRILIQTVSASNCKKGSLRYWLSAGPGDFQLSPSGCHQSGLYAIVIQDLSLAPHKSRGVKVITSSIPIKHPQFAITKSVNYLPNVLSKMEAEEAGAFAGIWLDSEGFVAEGPNMNVAFVTKEKELIMPQFDKILSGCTAKRVLTLAECLLREGKLQAIRTKNVTIEEGKMADEMMLIGSGVLVCPVVQWDKQVIGDGKEGPITQALLNLVVQDMKSGPPTVRIPVPY. 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02793 265 Gene3D - 90 255 IPR043132 -
Seca8g02793 265 Gene3D - 4 85 IPR043131 -
Seca8g02793 265 Pfam Amino-transferase class IV 4 226 IPR001544 GO:0003824
Seca8g02793 265 CDD PLPDE_IV 8 247 - -
Seca8g02793 265 PANTHER AMINO-ACID AMINOTRANSFERASE 7 257 - -
Seca8g02793 265 FunFam D-alanine aminotransferase 89 255 - -
Seca8g02793 265 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 9 252 IPR036038 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02793 Seca-Chr8 76416377 76418157 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02793 K18482 - gmx:100794026 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g02793 8 76416377 76418157 Seca8g02793 8 76416377 76418157 ECH