Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02645 ATGGCAGAGGGTCTTCGTATGGCCGTTGCTGTTATTGGGAATGTTGCCTCAGTGTCACTTTATGCTGCACCAACAGTTACCTTCAAAAGGGTCATAAGGAAGAAAAGCACAGAAGAGTTTTCATGCATTCCTTACATCATAGCACTCTTGAACTGTCTCCTCTTCACTTGGTATGGATTGCCTGTTATAAGCAAGAAATGGGAAAACTTCCCTCTGGTCACAGTTAATGGTGTTGGGATTGTTTTTGAGCTCTCTTATGTTCTCATTTATTTCTGGTATTCCTCACCTAAAGGAAAGGCAAGTTTTATTTTCTATCTTTTATGCCTGAGTTCTAGAAACACTGCTTGCACACAATGA 357 0.4062 MAEGLRMAVAVIGNVASVSLYAAPTVTFKRVIRKKSTEEFSCIPYIIALLNCLLFTWYGLPVISKKWENFPLVTVNGVGIVFELSYVLIYFWYSSPKGKASFIFYLLCLSSRNTACTQ. 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02645 118 Gene3D - 10 106 - -
Seca8g02645 118 FunFam Bidirectional sugar transporter SWEET 7 99 - -
Seca8g02645 118 Pfam Sugar efflux transporter for intercellular exchange 9 97 IPR004316 GO:0016020
Seca8g02645 118 PANTHER RAG1-ACTIVATING PROTEIN 1 16 107 IPR047664 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02645 Seca-Chr8 61703920 61704579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02645 1 99 Miscellaneous Gene Families AT5G53190 59.596 1.95e-43 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02645 K15382 - gmx:100785477 191.815