Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02569 ATGGTATCAGGAGATGATTTATACAACGTGATGTGTGCCATGGTGCCTCTATATTTCGCAATGCTGGTAGCTTATGGTTCAGTGAAATGGTGCAAGATGTTCACCCCAGAGCAGTGTTCCGGCATCAACCGTTTTGTGGCAGTGTTTGCAGTTCCTGTGCTCTCCTTCCACTTCATTTCCCTCAACAACCCTTACCAAATGGACACAAAGTTCATCATAGCAGACACTGTTTCCAAGCTCTTCGTCCTCCTCTTGCTCTCTATTTGGGCCATTTTCTTCACCAAAGGCTCCCTGGACTGGCTCATAACTATCTTCTCACTTGCCACCTTGCCAAATACCCTCGTCATGGGTATCCCTCTCCTCCAAGCCATGTACGGTGACTTCACCCAAAGCCTCATGGTGCAACTCGTCGTCCTCCAATGCATCATATGGTACACTCTATTGCTGTTTCTATTGGAATACAGAGCAGCGACCCTTTTGATCAAAAGCGAGTTCCCAGGGAACACCGCAGCGTCGATAACGAAAATCGAGGTGGACGGCGACGTGATTTCCCTCGACGGCCACGACGTTCCGCTCCGAACGCAATCGGAAACCGACAATAACGGCCGAATTTGCGTTCGAATCCGTCGTTCAATTTCTTCAGCACCAGAATCAACCTCTTCCTTTAACAACGGCATCACTCCGAGACCTTCAAATCTCTCCAACGCTGACATTTTCTCCATCAACACACCGCTTCAGCTTCTCGAAGGCGGTGGCGACCTTCCATTCGGTTACCCCGCGGTGGCGAGTCCTCGTCTCTCCGGTTATGCTTCCTCTGATGCTTACTCACTGCAGCCAACACCGCGGGCTTCCAATTTCAATGAGATGGAGACTATGGCAAATGGTACGCCTGTTTGGGGGAGATCTCCGGTGGCCGGCGGTAGGACTTGCCGGCAGAACTCGCCGGCGTTGTCGGGGGCGAGGGTTGTGTGGGAGTCGCCGGGGAAATGCCAGGAAGAAGAGAGACAAGGATGCAAGGACATTACCCTGTCAGATAAAGAAATTAGCTTCAGAGACAACATCAAAGTCCCAATGTCAGGGGAAGCTGCAGACCCCAAAGACACAGTTGCTGGTAACCAGAAAATGCCACACGCCTTTGTCATGATAAGGCTTATACTTATCGTAGTAGGAAGGAAACTTTCTCGAAACCCTAATACATATTCTAGTGTATTAGGACTTCTTTGGTCTCTAATCTCCTTCAAATGGAATATGGAAATGCCTAGTCTGATCAAATCATCTATCAAAATCATCTCGGATGCAGGCCTTGGGATGGCTATGTTTAGCTTAGGGCTATTCATGGCCCTTCAGCCCCGAATCATTGCTTGTGGTACCAAAAGAGCAGCCATGGGAATGGCCATCCGCTTCCTATGCGGGCCTCTTGTAATGTCAGCATCCTCCATTGCTATTGGATTGAGACATGACAAGTTGCATTTTGCCATTGTACAGGCTGCTCTTCCACAAGGGATAGTGCCATTTGTATTTGCAAGGGAATATGGGCTGCATCCTGATATTTTAAGCACAGGGGTAATCTTTGGCATGCTGATTTCCTTACCAATAACTCTCCTATATTACATATTTCTTGGCTTGTGA 1629 0.4862 MVSGDDLYNVMCAMVPLYFAMLVAYGSVKWCKMFTPEQCSGINRFVAVFAVPVLSFHFISLNNPYQMDTKFIIADTVSKLFVLLLLSIWAIFFTKGSLDWLITIFSLATLPNTLVMGIPLLQAMYGDFTQSLMVQLVVLQCIIWYTLLLFLLEYRAATLLIKSEFPGNTAASITKIEVDGDVISLDGHDVPLRTQSETDNNGRICVRIRRSISSAPESTSSFNNGITPRPSNLSNADIFSINTPLQLLEGGGDLPFGYPAVASPRLSGYASSDAYSLQPTPRASNFNEMETMANGTPVWGRSPVAGGRTCRQNSPALSGARVVWESPGKCQEEERQGCKDITLSDKEISFRDNIKVPMSGEAADPKDTVAGNQKMPHAFVMIRLILIVVGRKLSRNPNTYSSVLGLLWSLISFKWNMEMPSLIKSSIKIISDAGLGMAMFSLGLFMALQPRIIACGTKRAAMGMAIRFLCGPLVMSASSIAIGLRHDKLHFAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLISLPITLLYYIFLGL. 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02569 542 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 541 - -
Seca8g02569 542 NCBIfam auxin efflux carrier 1 542 IPR014024 -
Seca8g02569 542 Pfam Membrane transport protein 10 537 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02569 Seca-Chr8 58489462 58496703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g02569 1 520 Organic Solute Cotransporters AT1G77110 65.775 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02569 K13947 - gmx:100800139 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g02569 8 58489462 58496703 Seca8g02569 8 58489462 58496703 ECH