Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02510 ATGAAAGTGACATGGAAGAACAACAAGAAGAAACAGCGTTGTTTACCCGCGTTGTCACACTTCAATGACCTTCCTTTCGAGCATCATCAGCAGGACCAGCCCCATCCACACCCTAACAAGGACGCTGAAGAAAGTGATGAAGTGCGTGCTCCCAATCCTGACCAATCCCACCGCTCTGACTTGGAGGAGGCAAGACAACTGGCTAAGGAATTTCAAGCTCAAGGAGACCACCTTGCTGTGGTTGGAAAGTACCGTGAAGCACTGGGTAAATGGGAAGCTGCTCTTACATTGGCACCTGATGTTCCAGTTTTGCATGAACAAAAGGCCCAAGTTTTACTAGAAATTGGAGATGCTTGGAATGCTTTAAAGGCTGCAACTCGAGCTACTGAATTGGATCCATCTTGGCCTGAGGTATGTTAG 420 0.4762 MKVTWKNNKKKQRCLPALSHFNDLPFEHHQQDQPHPHPNKDAEESDEVRAPNPDQSHRSDLEEARQLAKEFQAQGDHLAVVGKYREALGKWEAALTLAPDVPVLHEQKAQVLLEIGDAWNALKAATRATELDPSWPEVC. 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02510 139 SUPERFAMILY TPR-like 65 137 IPR011990 GO:0005515
Seca8g02510 139 MobiDBLite consensus disorder prediction 1 63 - -
Seca8g02510 139 Gene3D Tetratricopeptide repeat domain 49 139 IPR011990 GO:0005515
Seca8g02510 139 MobiDBLite consensus disorder prediction 25 63 - -
Seca8g02510 139 PANTHER OSMOSIS RESPONSIVE FACTOR 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02510 Seca-Chr8 55392482 55395482 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02510 - - ccaj:109815748 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g02510 8 55392482 55395482 Seca8g02510 8 55392482 55395482 ECH