Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02171 ATGGCCACAGCAACCCCACACTGTCACTACTTTCTCTTCTTTCTTCTCACTCTCCTTCTCTCATCCTCCCTCCTCTCCGCAACAACACATGATGAAGAAGACAACCCCATCACCCGCTTCCAACGCTACCTCCGAATCAACACCGCTCACCCTAACCCCGATTACTCCTCCGCCGTCTCCTACCTCAAATCCCAAGCAACCTCCATCGGCCTCCACCACCGAACCCTAGAATTCTCCCCTGGCAAGCCCCTCCTCCTTCTCACATGGCCCGGCTCCAACCCTTCCCTTCCTTCCATCCTCCTCAACTCTCACCTCGACTCCGTCCCCGCCGAGCCCTCCAAATGGCTCCACCCTCCCTTCTCCGCCACTCTCACCTCCGACGGCGCCATCTTCGCCCGCGGCGCCCAAGACGACAAGTGCATCGCTATGCAGTACCTCGAGGCCATCCGCAACCTCTGTGGCCGCGGCTTCCAGCCAACCCGCTCCGTCCACGTGTCGCTCGTCCCCGACGAGGAGATCGGCGGCTTCGACGGCGCTGCAAAGTTCGTTGAGTCTGAGGACTTTGAGTCCCTCAACGTCGGGTTCGCGCTCGATGAAGGACAGGCCTCTCCCGGGGATGAGTTTAGGGTTTTCTACGCGGATCGGGTTCCGTGGGGGGTGAAGATCAAGGCGAAGGGACAACCAGGGCATGGTTCAAGGATGTATGATGATAGTGCGATGGAGAATTTGATGAAGAGCGTTGAAATTGTGAGTAGGTTTAGGGAGAGTCAGTTTGATGTGGTTAAGGCTGGGAAAGCTATGAATTCAGAGGTTATTTCGGTGAATCCTGTTTATGTGAAAGCTGGGGTTCCCTCTGAAGATGGGTTTGTGATGAATGTGCAACCTTCGGAAGCGGAAGCTGGTTTTGATCTTAGGTTGACACCTACGACGGACCCTGAGGAAATGAGAAGGAGAATTGCTGCGGAATGGGCGCCAGCTGTTAGAAATATGTCATATGAGGTGAGAACATTGCTTATAAAAATCTGTTTTTCCTTTTGCACCTTAATTCAAAATAGGTGA 1059 0.5411 MATATPHCHYFLFFLLTLLLSSSLLSATTHDEEDNPITRFQRYLRINTAHPNPDYSSAVSYLKSQATSIGLHHRTLEFSPGKPLLLLTWPGSNPSLPSILLNSHLDSVPAEPSKWLHPPFSATLTSDGAIFARGAQDDKCIAMQYLEAIRNLCGRGFQPTRSVHVSLVPDEEIGGFDGAAKFVESEDFESLNVGFALDEGQASPGDEFRVFYADRVPWGVKIKAKGQPGHGSRMYDDSAMENLMKSVEIVSRFRESQFDVVKAGKAMNSEVISVNPVYVKAGVPSEDGFVMNVQPSEAEAGFDLRLTPTTDPEEMRRRIAAEWAPAVRNMSYEVRTLLIKICFSFCTLIQNR. 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02171 352 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 135 174 IPR001261 -
Seca8g02171 352 Gene3D Zn peptidases 26 220 - -
Seca8g02171 352 Pfam Peptidase family M20/M25/M40 100 197 IPR002933 GO:0016787
Seca8g02171 352 Gene3D - 221 331 - -
Seca8g02171 352 Pfam Peptidase dimerisation domain 218 321 IPR011650 -
Seca8g02171 352 SUPERFAMILY Zn-dependent exopeptidases 33 223 - -
Seca8g02171 352 PIRSF ACY-1 26 345 - -
Seca8g02171 352 SUPERFAMILY Bacterial exopeptidase dimerisation domain 219 333 IPR036264 -
Seca8g02171 352 FunFam aminoacylase-1 isoform X1 219 330 - -
Seca8g02171 352 NCBIfam N-acyl-aliphatic-L-amino acid amidohydrolase 26 337 IPR010159 GO:0004046|GO:0005737|GO:0006520
Seca8g02171 352 FunFam Aminoacylase 1 28 219 - -
Seca8g02171 352 PANTHER AMINOACYLASE-1 25 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02171 Seca-Chr8 47312641 47313798 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02171 K14677 - gmx:100817383 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g02171 8 47312641 47313798 Seca8g02171 8 47312641 47313798 ECH