Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02073 ATGGCGAGAAAAACTAGCAATTGTGCCATATGCGAGAATACGAATCAAGCTTCCATATGTTCTATTTGTGTCAACTATAGGTTGAATGACTATAACACTTCTTTGAAATCACTGAAAGAGCGTCGAGATTCGTTGTACTCAACATTGAGCGAAGTTCTTGTCCGCAAGGGAAAGGGAGATGATCAAACAAATTGGAGAGTGCTTCAAAATGAAAAGCTTGCAAGGTTGAGGGAGAGGCTCCGTCATAGTAAAGAACAAGTCATTCAAGGAAGAGCTAAGATAGAGGCTATGTCTGCTGATCTGAAACTTAAATATGGAGTGCTTGAATCTTCCCTTTCTACGTTGGAAAAGAATCGAGTGGAACAACTGGAGAAGTTCTACCCTAATCTTATATGCACCCAGAGCTTAGGCCATGTAGCAATTACCTCTGAGCGTCTTCATAAACAGTCTGTGGTCATAAAACAGATATGCAAGTTATTTCCACAACGCCGGGTAGTCATAGAGGGAGAGAGAAGGGATGGTTGTAGTGGTCAATATGATCAAATTTGCAATGCACGCTTGCCTAGAGCACTTGATCCCCACTCAGTTCCATCAGAAGAGCTTTCTGCTTCTTTGGGATACATGGTGCAGCTTCTAAATCTTGTTGTTCACAACTTGGCTGCCCCAGCACTTCATAACTCAGGTTTTGCGGGTTCTTGCTCTCGCATCTGGCAACGAGATTCTTATTGGGATGCACGTCCTTCCTCGAGGAGTAATGAATATCCCCTTTTTATACCTCGCCAAAATTATTGCTCAACTGGTGGGGAAAACTCATGGTCTGATAAAAGTTCAAGCAATTTCGGCGTTGCTTCAATGGAATCTGACAGGAGGCCTCGCCTGGATTCATCTGGGAGTAGTAGCTTTAACTATTCATTAGCTTCTTCACATTCTGTTCAAACACACAAAGATCTGCAGAAAGGAATTTCACTCTTAAAGAAAAGTGTAGCATGCATCACAGCTTACTGTTATAACTCCCTATGTTTGGATGTCCCTTCTGAGGCATCTACATTCGAAGCATTTGCAAAGTTATTGGCTACACTCTCATCATCCAAGGAAGTTCGATCTGTTTTTTCTTTGAAAATGGCTCGCTCTAGGTATTATCACATTTATTTCCAGTGTCATAACTCATAA 1170 0.4179 MARKTSNCAICENTNQASICSICVNYRLNDYNTSLKSLKERRDSLYSTLSEVLVRKGKGDDQTNWRVLQNEKLARLRERLRHSKEQVIQGRAKIEAMSADLKLKYGVLESSLSTLEKNRVEQLEKFYPNLICTQSLGHVAITSERLHKQSVVIKQICKLFPQRRVVIEGERRDGCSGQYDQICNARLPRALDPHSVPSEELSASLGYMVQLLNLVVHNLAAPALHNSGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIPRQNYCSTGGENSWSDKSSSNFGVASMESDRRPRLDSSGSSSFNYSLASSHSVQTHKDLQKGISLLKKSVACITAYCYNSLCLDVPSEASTFEAFAKLLATLSSSKEVRSVFSLKMARSRYYHIYFQCHNS. 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02073 389 Coils Coil 66 86 - -
Seca8g02073 389 PANTHER UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN 7 377 - -
Seca8g02073 389 Pfam Vacuolar sorting 38 and autophagy-related subunit 14 8 366 IPR018791 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02073 Seca-Chr8 44740860 44754056 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02073 - - gmx:100776426 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g02073 8 44740860 44754056 Seca8g02073 8 44740860 44754056 ECH