Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02065 ATGCGAGAGTCTGAATATGCTAAGAGGAATCCACATACAAGGTTGATTAGACTTGGTATTGGTGACACTACAGAGCCAATACCAGACATCATAGCTTCTGCCATGGCTGAGAAAGCATTGGCTCTATCAACGGTTCAAGGCTACAGGGGTTATGGACCTGAACAAGGCCACAGGGAGCTAAGGATAGCAATAGCAGAAACAATTTACCAAGACATGCAAGTAAAAGAAAAGGAAATTTTTGTATCTGATGGTGCTCAGTGTGATATTTCACGCATTCAGATGCTTTTGGATGCTAATTTGTCAGTAGCTGTACAGGACCCAACTTTTCCGGCATACATAGATTCCAGTGTCATTGTTGGAAGGGCTGGCAAGTTCCAAGCAAAAACTGAGAAATACAAAAAGGTGGTTTACATGAAGTGTGGGCCTGAGAATAATTTCTTTCCAGACTTATCAACTACTCCAAGGGCTGATGTGATTTTCTTTTGTTCTCCAAACAATCCAACTGGTAGTGCTGCATCTAGACAGCAACTGAAGCAACTTGTGGACTTTGCAAAAGTAAATGGATCTATAATCATTTATGACTCTGCTTATGCTGCCTACATATCAGATGAAAGCCCAAGATCAATCTTTGAAATTCCTGGAGCCAGAGAGGTAGCAATTGAAATTTCATCATTTTCCAAATTTGCTGGTTTTACTGGTGTCCGCCTTGGATGGACAGTTATCCCTGAAGAACTGTTGTATGCTAATGGTTATCCTGTCATAAGGGATTATAATCGCATTGTGTGCACTTGCTTCAATGGTGCATCAAATATTGTTCAAGCTGGTGGACTTGCTTGCCTTTCTCCTCAAGGATTTCAGGCACTAAAAAGTACCGTAGGCCACTACATGGAAAATGCCAAAATCCTTGTTGACACATTTGAATCACTTGGTCTAAAGGTGTATGGTGGCAAAAATGCCCCTTATGTATGGGTGCATTTTCCAGGATTAAGTTCATGGGACGTGTTCAACAAAATTCTTGAGAGAGCAGCCATAGTCACCATCCCAGGTATAGGATTTGGTCCTGGCGGCGAGGAGTATATTAGAGTTAGTGCCTTCGGTCACAGGGAATGTATATTGGAAGCTTCAAGGAGAATGAGAAACCTTCTATGA 1149 0.4178 MRESEYAKRNPHTRLIRLGIGDTTEPIPDIIASAMAEKALALSTVQGYRGYGPEQGHRELRIAIAETIYQDMQVKEKEIFVSDGAQCDISRIQMLLDANLSVAVQDPTFPAYIDSSVIVGRAGKFQAKTEKYKKVVYMKCGPENNFFPDLSTTPRADVIFFCSPNNPTGSAASRQQLKQLVDFAKVNGSIIIYDSAYAAYISDESPRSIFEIPGAREVAIEISSFSKFAGFTGVRLGWTVIPEELLYANGYPVIRDYNRIVCTCFNGASNIVQAGGLACLSPQGFQALKSTVGHYMENAKILVDTFESLGLKVYGGKNAPYVWVHFPGLSSWDVFNKILERAAIVTIPGIGFGPGGEEYIRVSAFGHRECILEASRRMRNLL. 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02065 382 Gene3D - 25 282 IPR015421 GO:0003824
Seca8g02065 382 Gene3D Aspartate Aminotransferase, domain 1 2 378 IPR015422 GO:0003824
Seca8g02065 382 Pfam Aminotransferase class I and II 15 364 IPR004839 GO:0009058|GO:0030170
Seca8g02065 382 SUPERFAMILY PLP-dependent transferases 4 378 IPR015424 -
Seca8g02065 382 CDD AAT_like 16 379 - -
Seca8g02065 382 FunFam LL-diaminopimelate aminotransferase, chloroplastic 25 281 - -
Seca8g02065 382 NCBIfam LL-diaminopimelate aminotransferase 3 380 IPR019942 GO:0008483
Seca8g02065 382 PANTHER AMINOTRANSFERASE 2 381 IPR019942 GO:0008483
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02065 Seca-Chr8 44256736 44259556 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02065 K10206 - qsu:112023739 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g02065 8 44256736 44259556 Seca8g02065 8 44256736 44259556 ECH