Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02037 ATGACGAGCTGTACCAACCTCAAAATATGGCTTCTTAACTTGCTTACTTTCTTCACTATGCTTTCTATTACCCATGGTAGACCAAATGTTGGGTTTCGAGTGAAAGCAGTTAATCTAGGTGGTTGGTTAGTTACTGAAGGTTGGATGAAACCTTCTCTCTTCGATGGAATTCCAAATAAGGACTTCTTGGATGGAACAGGTCTTCAGTTCAAATCTGTGACAACAGGGAAATATCTCTGTGCAGAGTTAGGAGGTGGAACAATCCTAGTTGCAAACCGCACAGCTGCTTCGGGTTGGGAAACATTTTCATTGTGGAGGATAAACGAGACCACTTTTAGATTCAGGGTGTTCAACAAACAGTTTGTTGGGTTAGATGGGATTAACGTGGTTGCTATTTCCAATTCTTCCACTGATTCTGAAACGTTTCATGTCGTTAAGGAAAGTGACAATTCAAACCGTGTTCGAATCAAAATATCAAACGGATACTTCTTGCAGGCGAAGACAGAGGATGTGGTGACTGCTGATGTTTCAGAGGTGAGTGGATGGGGAGATGATGACCCAACCGTTTTTGAATTGACAATCACTGGAAAGTTGCAAGGCGAATTCCAAGTCACAAATGGTTATGGACCCATAAAAGCTCCCCAAGTTATGAAGGAACACTGGAGCACTTTTATTGTTGAAAAAGATTTCGAGTTCATAGCAAGTAATGGATTAAATGCTGTTAGAATTCCCGTTGGTTGGTGGATTGCAAGTGATCCAACTCCACCCCCACCTTATGTTGGGGGTTCCTTGCACGCACTAGATAATGCCTTCTTGTGGGCACAGAAATATGGATTGAAAATCATCATTGATCTTCATGCTGCTCCCGGTTCTCAAAATGGCTATGAGCACAGCTCTTCAAGAGATGGTTCACAAGAATGGGGGAAAACAGATGAAAACATCCAACAAACAGTTCAAGTTATAGACTTCCTAACTGCAAGGTATGCAAAAAGCCCAAGCCTTTATGCAGTTGAGCTCTTAAATGAGCCTCGTGCACCTGATGCAACACTTGAGAGCTTGAACAAGTACTACAAGGCTGGTTATGAAGCAGTGCGCAAACACTCATCCACAGCTTATGTGGTGTTGTCAAATAGGCTATCAGCTTCAAACCCCAGGGAACTCTTCCCTATTGCGAATGGCCTCATGCGATCTGTGATTGATGTTCACTATTACAACCTCTTCAACGATCAATTATTTAACAGCATGACTGTACAACAGAACATTGATTTCATCAACAACAACCGCTCATCAGATTTGAAGGCTGTCACAACCTCGAATGGTCCTCTAACTTTTGTCGGTGAATGGGTTGCTGAGTGGCAAGTTAAGGGTGCTACAAAAGAAGACTATCAAAGATTCGCCAAGGCCCAATTAGATGTTTATGGACGAGCAACATTTGGGTGGGCTTATTGGGCTTTCAAAAACGTTAACAACCATTGGAGTCTGGAGTGGATGATTAATAATGGTTATATCAAGCTTTAG 1518 0.4229 MTSCTNLKIWLLNLLTFFTMLSITHGRPNVGFRVKAVNLGGWLVTEGWMKPSLFDGIPNKDFLDGTGLQFKSVTTGKYLCAELGGGTILVANRTAASGWETFSLWRINETTFRFRVFNKQFVGLDGINVVAISNSSTDSETFHVVKESDNSNRVRIKISNGYFLQAKTEDVVTADVSEVSGWGDDDPTVFELTITGKLQGEFQVTNGYGPIKAPQVMKEHWSTFIVEKDFEFIASNGLNAVRIPVGWWIASDPTPPPPYVGGSLHALDNAFLWAQKYGLKIIIDLHAAPGSQNGYEHSSSRDGSQEWGKTDENIQQTVQVIDFLTARYAKSPSLYAVELLNEPRAPDATLESLNKYYKAGYEAVRKHSSTAYVVLSNRLSASNPRELFPIANGLMRSVIDVHYYNLFNDQLFNSMTVQQNIDFINNNRSSDLKAVTTSNGPLTFVGEWVAEWQVKGATKEDYQRFAKAQLDVYGRATFGWAYWAFKNVNNHWSLEWMINNGYIKL. 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02037 505 FunFam Glucan 1,3-beta-glucosidase A 45 183 - -
Seca8g02037 505 SUPERFAMILY (Trans)glycosidases 33 503 IPR017853 -
Seca8g02037 505 SUPERFAMILY Actin-crosslinking proteins 68 182 IPR008999 -
Seca8g02037 505 FunFam Glucan 1,3-beta-glucosidase A 186 505 - -
Seca8g02037 505 Gene3D - 45 182 - -
Seca8g02037 505 Pfam Cellulase (glycosyl hydrolase family 5) 217 487 IPR001547 GO:0004553|GO:0071704
Seca8g02037 505 PANTHER FASCIN 30 505 IPR010431 GO:0007015|GO:0051015
Seca8g02037 505 Gene3D Glycosidases 183 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02037 Seca-Chr8 43536025 43543085 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02037 - - gmx:100790619 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g02037 8 43536025 43543085 Seca8g02037 8 43536025 43543085 ECH