Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g02013 ATGAAGAAGATGAAGGCAGAGACGGTGACACTGGTTCTGGTGAACCTGGCAGGGATCATGGAAAAAGCTGATGAGTCATTGCTTCCTGGTGTGTACAAGGAAGTCGGTGCAGCACTTCATACTGATCCCACAGGACTTGGTTCCTTAACTCTCTTCCGATCCATTGTTCAGTCCTCTTGCTACCCTATAGCCGCGTACCTCGCTGCGCGTCACAACCGAGCCCACGTCATAGCTCTCGGTGCTTTTCTCTGGGCTGCCGCCACTTTCCTCGTTGCCTTCTCCTCCACTTTCTTTCAGGTAGCTGTATCGCGGGGATTAAATGGGATTGGCCTTGCACTTGTAGCACCTGCAATCCAATCACTTGTCGCTGACTCAACTGAGGATAGCAATCGTGGCATGGCCTTTGGATGGCTTCAACTAACAGGCAATCTTGGTTCAATTATCGGTGGCCTCTTCTCAGTGCTGATTGCTCCAATAACAGTCTTTGGTATCCCTGGTTGGAGACTTTCCTTTCATATTGTTGGATTAATAAGCATTATAGTAGGTACTTTAGTGTACCTCTTTGCCAATGACCCACATTTCTCAGATAACGGTACAAATGATAGCAATCAAGATTCAAATAAAACATTTTGGTCAGAAGTAAAAGATCTGGTCCAGGAAGCCAAGTCAGTTTCTAAGATTTCATCTTTCCAGATTATTGTTGCACAAGGTGTCACTGGCTCCTTCCCTTGGTCAGCTTTGTCATTTGCACCAATGTGGTTAGAGCTTACTGGCTTCTCCCATGAGGAAACTGCTTTCCTCATAGCTTGCTTTGTGATTGCCAGTTCCATTGGGGGTTTGTTTGGAGGTAAGATGGGGGATATCCTCTCCAAGCGTCTTCCAAATTCTGGGAGGATAATTCTAGCGCAGATAAGCTCTGGATCAGCAATTCCCCTAGCAGCAATTCTTCTGCTGGGTTTACCAGATGATCCATCCACAGCAATACCTCATGGTTTGATTATGATCATTATGGGGCTCTTTATATCTTGGAATGCTCCAGCTGCAAATAATCCAATTTTTGCAGAGATTGTTCCGGAGAGAGCCCGAACAAGTGTATATGCCTTGGACCGATCCTTTGAATCTATACTGTCATCTTTTGCTCCCCCTGCTGTGGGGATTTTGGCTCAGCATGTTTATGGGTATAAGCCCATTCCTGAAGGATCTACTGAATCTCAAGAGATTTTAACAGATAGAGAGAATGCTGCATCATTGGCTAAGTCTCTTTATACAGCAATAGGTATTCCAATGGCTCTCTGCTGTTTAATCTACTCATTTCTTTATAGGACCTATCCAAGGGACAAGGAACGTGCTAGGATGGAGGTTTTAATTGAATCAGAGATGCAGCAAATTGAATCAGATGGCTTAGCCATGGATAAAGAGATTGCATCAGAAGAATTGTCTATTGGGGATTATGATGGTGATGGTGTTGATCTTGATGATGAAGAGAACACATTACTCTACAGGCAGTTAACATTCTCCAAGTCTCCAACTTAG 1533 0.4449 MKKMKAETVTLVLVNLAGIMEKADESLLPGVYKEVGAALHTDPTGLGSLTLFRSIVQSSCYPIAAYLAARHNRAHVIALGAFLWAAATFLVAFSSTFFQVAVSRGLNGIGLALVAPAIQSLVADSTEDSNRGMAFGWLQLTGNLGSIIGGLFSVLIAPITVFGIPGWRLSFHIVGLISIIVGTLVYLFANDPHFSDNGTNDSNQDSNKTFWSEVKDLVQEAKSVSKISSFQIIVAQGVTGSFPWSALSFAPMWLELTGFSHEETAFLIACFVIASSIGGLFGGKMGDILSKRLPNSGRIILAQISSGSAIPLAAILLLGLPDDPSTAIPHGLIMIIMGLFISWNAPAANNPIFAEIVPERARTSVYALDRSFESILSSFAPPAVGILAQHVYGYKPIPEGSTESQEILTDRENAASLAKSLYTAIGIPMALCCLIYSFLYRTYPRDKERARMEVLIESEMQQIESDGLAMDKEIASEELSIGDYDGDGVDLDDEENTLLYRQLTFSKSPT. 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g02013 510 CDD MFS_spinster_like 11 436 IPR044770 -
Seca8g02013 510 FunFam Major facilitator superfamily protein 2 399 - -
Seca8g02013 510 ProSiteProfiles Major facilitator superfamily (MFS) profile. 10 447 IPR020846 GO:0022857
Seca8g02013 510 Pfam Major Facilitator Superfamily 23 347 IPR011701 GO:0022857|GO:0055085
Seca8g02013 510 PANTHER SPINSTER 8 463 IPR044770 -
Seca8g02013 510 SUPERFAMILY MFS general substrate transporter 10 445 IPR036259 -
Seca8g02013 510 Gene3D MFS general substrate transporter like domains 230 453 IPR036259 -
Seca8g02013 510 Gene3D MFS general substrate transporter like domains 4 195 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g02013 Seca-Chr8 42707704 42711641 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g02013 - - gmx:100783378 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g02013 8 42707704 42711641 Seca8g02013 8 42707704 42711641 ECH