Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01947 ATGACAGTGTTGAGCAAGGTCTTGTATGGCTCTGTTTATGTCAAATCTTATGACTGGATCAAAGTGGATACTACTAAATGCCAAACAATAGGATTGGCGGGCAGAGTAATAGATGATGTGATCACAGCGCCACATGAGCCATGCGTTTTATTTCCAAGAAGTGGTGGCAACATTCATTCTTTTAGAGCGTTGACGACATGTGCAATACTAGATGTGTTGTCTCCACCATATGCTGAAGAATTTGGAAGGCCTTCTACTTACTATAAAGACGTTCCTATCCCTTCCCTTACTGGTTATGCCATGCTTGAGGAGATACCATTGCCTAATGATCTAGTTGTTCATGGTGCACCATATCTTGGACCTTCAGTTGTAACCGTTGACGATTATGACTTTTGTCAAATTGGTTTGTAA 411 0.4112 MTVLSKVLYGSVYVKSYDWIKVDTTKCQTIGLAGRVIDDVITAPHEPCVLFPRSGGNIHSFRALTTCAILDVLSPPYAEEFGRPSTYYKDVPIPSLTGYAMLEEIPLPNDLVVHGAPYLGPSVVTVDDYDFCQIGL. 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01947 136 Pfam PCO_ADO 1 123 IPR012864 GO:0016702
Seca8g01947 136 SUPERFAMILY RmlC-like cupins 1 89 IPR011051 -
Seca8g01947 136 PANTHER UNCHARACTERIZED 1 123 IPR012864 GO:0016702
Seca8g01947 136 CDD cupin_ADO 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01947 Seca-Chr8 40754268 40756457 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01947 K23953 - gmx:100811165 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01947 8 40754268 40756457 Seca8g01947 8 40754268 40756457 ECH