Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01939 ATGGGTGTCTCCTTCCTCTCAACTTTCCCTACTCTGCTTCCACTTGTTGCTCATAATCCACTACCCACCACCAGATACCAACCTCGTTCTGTGGCAATTTGTTGTAATAAAATCAAAGCTGATGTTAGTGATGAAGACCAGTTCCATTGGAGAAGGAGAGACATTCTTAAATGCTTCGGAACGACCATTGGCTTGGAATTGATAGGAAGCTCCGGATCACTTGTTGGAATAGCCAATGCTGCTGACTTGATACAACGCAGACAGCGTTCTGAATTTCAATCTCAAGTTAAGGGAACACTTTATACAGCCATAAAGGGAAATCCTGATCTTATTCCATCCATGCTAACACTGGCTATAAATGACGCTATGACTTATGATAAGGCAACAAAATCAGGTGGCCCAAATGGTTCTATACGGTTCAGCTCAGAAATAAGTAGACCTGAAAATAAGGGGCTTTCAGCTGCCTTAAATTTATTAGAGGAAGCAAAAAAGGAGATAGATTCATATTCCAAAGGTGGACCCATTTCGTATGCAGATCTCATCCAATATGCAGCACAAAGTGCTGTCAAGGCTACATTTTTAGCTTCTGCCATTAAAAAATGTGGTGGAAATGAGGAGAAAGGGAATTTACTGTACACTGCTTACGGATCAAATGGACAGGTTTGCTTTTGA 672 0.4122 MGVSFLSTFPTLLPLVAHNPLPTTRYQPRSVAICCNKIKADVSDEDQFHWRRRDILKCFGTTIGLELIGSSGSLVGIANAADLIQRRQRSEFQSQVKGTLYTAIKGNPDLIPSMLTLAINDAMTYDKATKSGGPNGSIRFSSEISRPENKGLSAALNLLEEAKKEIDSYSKGGPISYADLIQYAAQSAVKATFLASAIKKCGGNEEKGNLLYTAYGSNGQVCF. 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01939 223 Pfam Peroxidase 97 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g01939 223 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 63 204 IPR044831 GO:0004601|GO:0034599
Seca8g01939 223 PRINTS Plant ascorbate peroxidase signature 129 139 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca8g01939 223 PRINTS Plant ascorbate peroxidase signature 111 126 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca8g01939 223 PRINTS Plant ascorbate peroxidase signature 143 167 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca8g01939 223 CDD plant_peroxidase_like 96 207 - -
Seca8g01939 223 Gene3D - 80 222 - -
Seca8g01939 223 Coils Coil 152 172 - -
Seca8g01939 223 SUPERFAMILY Heme-dependent peroxidases 82 193 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01939 Seca-Chr8 40595475 40599788 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01939 K00434 - gmx:100795192 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01939 8 40595475 40599788 Seca8g01939 8 40595475 40599788 ECH