LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca8g01868	ATGTTCACTCAAGGCCTTGACAAAACCCAACTTCGATGGGTTAGAGAGAAGGAAGTTCCATTCTCAAACAGCACATTGAGATCTCGCAATGATCCCATCACTGGAATTAAGGGTGCTAGTGGCAGAGGGTTTGGGCTACCACCCCCATCAAAATTCAGAAGTGGGCATCTTCCTGCTAATGCAATCCCTGTATCAACAGTTATACCGGCTGAGACCGGCGATAGCGCTTCGAATTCTGGTAATGATGACAGCATTGAGTCAGAGGAGGAAGTTTATGGTGGCAGGTATTCATTGGATTCGTCACCACAAGACCACAGAGCCCCCAATGGTGCTGCTAGGAGATATGGGAACCTTACTCAAAGGGGACCACGATATGCGAGTGATTATACATACTCTGAGGTCAGTTCTTCCAGGGAAACACTGGTTGGGAGACCTGGTCCTGTGCGGGATCCATTGATGAGGGCGGCTGCAAATGTTAGGCAGAGTGGTTTCACAGAGGATGATTCATCGGATTCTGCGGCTAGCTCTGAATTTTCTACTACACATGTAGGAGGAAGTATCAATGGGCCTCTGCCAAGAAGTAGAGCTTATGTGTCAGAAGGGTATGCTTCTAGTGTGCCTTCAAGAATGAATGTGCAAAGTGCTGTAAAGAAGAATGGAAGATTATCTGATGATGATGATGATGACATTCCCAGTGCACCCCCATTTTGTGGTTCTACTCAAGAGATCAGGCAAACAAATGAGAAAATTCCCACCTCTGGAGTACATGCTACTCCAAATGAAGCAGAATCAAGTATTTTGAAATCTATGTCTGGGGATAAGATGGAGAACCATGTTGGTGATGAGAGCCATGACCAATTTGTTAGAACTGCTACTGGTTCAGAGCCAGCTGCATCTTCAAATTCAAACCCACCCCGCCTTCCAACATTTCACGCTAGTGCTCTTGGGCCATGGCATGGAGTGATTGCATATGATGCTTGTGTGCGTCTTTGCCTTCATGCTTGGGCAATGCAGTGCATGGAAGCTCCAATGTTTTTGGAAAATGAATGTTCTTTACTTAGGGATGCATTTGGATTGAGACAGGTGCTACTACAATCAGAAGATGAACTAATGGTCAAGTGCAATCAAGAGCTTTCGAGTGAGGGTGTTGCTCCAAAACCCAAAAAACTTATTGGGAAGATGAAGGTGCAAGTACGTAAAGTCAAAATGGGTCTGGACCCTCCTACTGGCTGTAGTATGTCATCATTAATGACAAACAAAATTAAAATGGAATATGTGCGACACCACTTGTCCCATTTGCAATCAAAACTGTCTTCTGGGTGGCAAGCTCTCAGGAGAATTCGATTTGCACCACATTTGCCCGCAAATGGTTCTCTGGCACGACAAAGTTTGGCATATGTGCATGCTAGCACCCGCTATCTACAGCAGGTGTCTGGACTCCTGAAAGTTGGTGTAACAACTCTACGGAGCAGTTCATCATCCTATGAAGTTGTACAAGAGACATACTCGTGTTTTCTAAGACTAAAAAGCTCAGTTGAAGAAGATGCCATTAGGTTGCAGCCTGGATCTACTGAAGTCCATATGTTTTTTCCAGATAGCCTTGGAGATGATTTGCTTGTTGAAGTTCAAGATTCCAAGGGAAAGCACTTTGGCCGTGTTCTTGTCCAAGTGGCTACTATAGCTGATAATCCGGCTGACAAAGTACGCTGGTGGCCTATTTATCGTGAACCAGACCATGAGCTTGTGGGTAACATACAACTTTATATAATTTATTCAACAAGTGCAGATGACAATAGCCATCTTAAGTGTGGCTCTGTAGCAGAAACAGTTGCATACGACTTAGTTTTAGAGGTTGCAATGAAAGTTCAGGGCTTTCAGCAAAGGAACCTATCGTTGCATGGTCCATGGAAATGGCTTTTGACAGAGTTTGCATCATATTATGGGGTATCTGAGATATATACCAAGCTGAGGTATCTATCTTATGTCATGGATGTGGCTACACCAACAGCAGACTGCCTTAACTTGGTGTATAATCTGCTTGCACCTGTTATCATGAAGGGAAATGGCAAGACTTCTTTGAGCCACCAAGAGAACCGAATACTAGGAGAGACCAAGGATGAAATTGAACAGATACTCACTCTTGTTTTTGAGAATTACAAGTCACTTGATGAATCACATTTCTCGGGTATCTCAGAGGTTTTCAGACCAGCATCCGGTCGTGCAGCGCCTGCGTTGGAACCTGCTGTTAAACTTTACAAGCTTCTCCATGATATTTTATCTCCTGAGGCCCAAACTGCTTTCTGTCATTATTTCCAGGTTGCTGCAAAAAAGAGGTCAAGAAGGCACCTGAGTGAAACGGATGAATATATTACACAGAATAATGAAGGCAGTCTGATGGATAGCATGGCAATGTCTACTGCTTATCAGAAGATGAGAAACCTTTGCATAAATCTTAGAAATGAGATACATACTGATATCCAGATTCATAATCAAAATATACTCCCTAGCTTTGTAGACCTGCCAAATCTTTCTGCTTCCATATACAGCACAGAGCTTTGCAATAGACTACGAGCCTTCCTCATATCTTGTCCACCAACAGGCCCATCATCACCAGTAGCAGATCTTGTTATTGCTACATCAGATTTTCAAAGAGATCTTGCAAGCTGGAATATTAGTCCTATCAAAGGTGGAGTGGATGCAAAAGAGTTGTTCCATTTATATATCCTTGTCTGGATCCAAGATAAACGCCTGTCTTTGCTGGAGACATGCAAACTAGATAAGGTAGTAAAATGGTCTGGAGTTAGAACACAGCATTCTACTACTCCCTTTGTTGATGACATGTATGAGCGGCTGAAGGAGACATTGACAGACTATGAGGTCATCATTTGCCGCTGGCCAGAATATACCTTGGTTTTAGAGAATGCCATTGCCGATATTGAAAAGGCCGTTGTGGAAGCTTTAGACAAGCAATATGCAGATGTATTATCTCCTCTCAAAGAAAGCATGGCTCCTAAGAAATTTGGGCTTAAATATGTGCAGAAACTTGCCAAACGGTCTACATGTGCCTATGTGGTTCCTGATGAGCTTGGAATTCTTTTGAATTCCTTGAAGAGAATGCTCGACGTCTTGCGTCCCAGGTTAGAATCACAGTTCAAGTCATGGGGTTCTTGCTTGCCAAATGCTGGAAACTCAGCACCTGGTGAGCGACTTAGTGAAGTGACAGTGATGCTGAGAGCGAAGTTCAGGAATTACCTGCAGGCTATTGTGGAGAAACTCGTGGAGAATACAAAGTTACAAAATACTACAAAATTAAAAAAGATTCTTCAAGATTCAAAGGAAACTGTGGTAGAGTCTGATTTAAGAAGTAGAATGCAGCCACTGAAAGACCAGTTGGCTAATACCATAAGTCACCTTCACAGTGTCTTTGAGACCAATGTTTTCATTTCCACCTGTCGAGGTTATTGGGATCGAATGGGGCAAGAAATTTTAAGTTTCTTGGAGAACAGAAAAGAGAATAGATCGTGGTACAAGGGTTCAAGGGTGGCTGTTTCTATTCTGGATGATACCTTTGCCTCACAGATGCAGCAGCTTCTAGGAAATGCATTACAAGAGAAAGACCTGGAGCCACCAAGATGCATCATGGAAGTGCGCTCCATGCTCTGCAAAGATGCTCCCAACCATAAGGACAACGGTTTTTACTATTAG	3705	0.4327	MFTQGLDKTQLRWVREKEVPFSNSTLRSRNDPITGIKGASGRGFGLPPPSKFRSGHLPANAIPVSTVIPAETGDSASNSGNDDSIESEEEVYGGRYSLDSSPQDHRAPNGAARRYGNLTQRGPRYASDYTYSEVSSSRETLVGRPGPVRDPLMRAAANVRQSGFTEDDSSDSAASSEFSTTHVGGSINGPLPRSRAYVSEGYASSVPSRMNVQSAVKKNGRLSDDDDDDIPSAPPFCGSTQEIRQTNEKIPTSGVHATPNEAESSILKSMSGDKMENHVGDESHDQFVRTATGSEPAASSNSNPPRLPTFHASALGPWHGVIAYDACVRLCLHAWAMQCMEAPMFLENECSLLRDAFGLRQVLLQSEDELMVKCNQELSSEGVAPKPKKLIGKMKVQVRKVKMGLDPPTGCSMSSLMTNKIKMEYVRHHLSHLQSKLSSGWQALRRIRFAPHLPANGSLARQSLAYVHASTRYLQQVSGLLKVGVTTLRSSSSSYEVVQETYSCFLRLKSSVEEDAIRLQPGSTEVHMFFPDSLGDDLLVEVQDSKGKHFGRVLVQVATIADNPADKVRWWPIYREPDHELVGNIQLYIIYSTSADDNSHLKCGSVAETVAYDLVLEVAMKVQGFQQRNLSLHGPWKWLLTEFASYYGVSEIYTKLRYLSYVMDVATPTADCLNLVYNLLAPVIMKGNGKTSLSHQENRILGETKDEIEQILTLVFENYKSLDESHFSGISEVFRPASGRAAPALEPAVKLYKLLHDILSPEAQTAFCHYFQVAAKKRSRRHLSETDEYITQNNEGSLMDSMAMSTAYQKMRNLCINLRNEIHTDIQIHNQNILPSFVDLPNLSASIYSTELCNRLRAFLISCPPTGPSSPVADLVIATSDFQRDLASWNISPIKGGVDAKELFHLYILVWIQDKRLSLLETCKLDKVVKWSGVRTQHSTTPFVDDMYERLKETLTDYEVIICRWPEYTLVLENAIADIEKAVVEALDKQYADVLSPLKESMAPKKFGLKYVQKLAKRSTCAYVVPDELGILLNSLKRMLDVLRPRLESQFKSWGSCLPNAGNSAPGERLSEVTVMLRAKFRNYLQAIVEKLVENTKLQNTTKLKKILQDSKETVVESDLRSRMQPLKDQLANTISHLHSVFETNVFISTCRGYWDRMGQEILSFLENRKENRSWYKGSRVAVSILDDTFASQMQQLLGNALQEKDLEPPRCIMEVRSMLCKDAPNHKDNGFYY.	1235

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca8g01868	1234	MobiDBLite	consensus disorder prediction	162	187	-	-
	Seca8g01868	1234	MobiDBLite	consensus disorder prediction	22	261	-	-
	Seca8g01868	1234	MobiDBLite	consensus disorder prediction	238	261	-	-
	Seca8g01868	1234	MobiDBLite	consensus disorder prediction	204	218	-	-
	Seca8g01868	1234	PANTHER	PESTICIDAL CRYSTAL CRY8BA PROTEIN	1	1227	-	-
	Seca8g01868	1234	MobiDBLite	consensus disorder prediction	123	139	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca8g01868	Seca-Chr8	38561293	38573895	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca8g01868	-		-	gmx:100779084	2167.12

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Seca8g01868	8	38561293	38573895	Seca8g01868	8	38561293	38573895	ECH