Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01861 ATGACTAACAAAAGTGCTGAATTGACTCGGGTAAATGGTGATGTTTCTCGTCCCTCTCCTAATCTTCAGCCTCAGTCTGGGCCACTAGATCCTTTGCATTCTCGTAGTGGCAATGGCAATGAGGTTTTCAAGAATGGGCCACTTTTCATATCTTCCAAAGGAATTGGATGGACATCATGGAAGAAAAGGTGGTTTATTTTAACACAAACTTCACTTGTTTTCTTCAGAAGTGATCCGAGTGTTATTTCTCAGAAGGGAAATGAAGTTAATTTGACTCTTGGTGGCATTGACCTCAACAATTCAGGCAGTGTTGTTGTCAAAGAAGATAAGAAACTTTTGATTGTACAATTTCCTAATGTTCGTGATGGACGAGCATTCACACTTAAGGCAGAAACGCTTAAGGATTTATATGAGTGGAAGCTTGCACTTGAGAATGCTTTGGCACAAGCACCCAATGCTGCTAATTTGATGGGGCAAAATAATATCTTAAGGAGTGATCAGACTGATTCACTTGATAATTATCTGGACCAGTTGAAGGATAGAGAAACAATAAAATATACAGTCATTGGGCGACCAATTTTACTTGCTTTGGAGGAGGTTGATGGAACTCCATCCTTTTTGGAGAAAGCCTTGAGGTTCATAGAAGAGCATGGAGTCAAAGTGGAAGGGATCTTACGACAAGCGGCCGATGTTGATGATGTTGAAAATCGAGTGCGGGAATATGAACAAGGAAAAATTGAGTTTTCTAAGGAGGAGGATGCACATGTTATTGCTGATTGTGTTAAGCATGTACTTCGGGAATTTCCATCTTCTCCAGTCCCTGCATCTTGTTGTAAGGCGCTCTTAGAAGCTTCTCGAACTGCACGTGCCAGTAGGGTTTCTAATATGCGTGCAGCAATATGTGACACTTTTCCTGAACCAAACCGCCGTTTATTACAAAGAATACTCTTGATGATGCAAACTATAGCTTCCCACAAAGCAGACAATAGAATGAGCTCATCTGCTGTGGCAGCATGCATGGCACCATTACTTCTTCGCCCTCTTCTAGCTGGGGATTGTCAGATTGAAAATGATTTTGATGTAGGTGGTGATGGTTCTTTACAACTTCTACAAGCAGCTGCCGCAGCTAACCATGCTCAAGCAATCGTTATTACTTTATTAGAAGAATATGACATCATATTTGGGGAAGGTTCTGCGTCCCCTGGCCCTGATATGTTCATGGATTCAGAAGATAGTGGATCTGAGAGTGAGGAGGCTACTGATGATGATTTGTCATATGATGATTATTATGATGATGAGCAAGATGAATCAATACAGGAGTCAGATGTAGATGAAGATGATGATCTTGTTAGTGAAATCAATAGTGAGACTGGAGACTCTATGGTCAGTGACGAATATAATGATAAGGACCATGATCTTTCTGATTCAAGTTCAAAATCCTCTGAGGTTAGTAATGATCTTGAAGTCGATCAAATGTTGTCAACAACTTCACTTGAAGTCTCTTTGTGTCAATGTGAAGATACCAAAAGTTGTGAAAGTGTCACAAGCCCAAATAATACTGCTTCTGTAGATGAGTCCAATGAACCTACTGATATAATTGAAGACTTATCTCAATGCCAAACTACAATACATAAATCAAATTGTCCTATCCCTTCTTCATGTATGAACAAATCTATAACCATACCCAACAACCTACCACATCGGTGTCGCAATGTATTAGGGCGAAACTCTGCAAGGAAGAACCTTTCCATGGAATCCATTGATTATGTTGATGAATATGAAGCTGAAATTGAGAAGCTTGAAGATGTTCAGACCGAATTGCAAAACCAAATTGCAGAGGTAAAGGTAAATGCAAAGCTACATTCTAATATGGAAACCCAAAAGCAAGCCTTGCAAGAGCGTCACCTGGCCCTTGAGCAAAATGTGGCTAGACTGCAGGAACAATTGCTAAATGAGAAGAGTTCTCGAGCAACTCTTGAAGCAGGACTTAAGTTACCTCCAGAAACCTTGTCTGATTTATCTAGTGTTGATGAAAAGACCAAGGCAGATCTTGACGAATTAGCAATGATAGAAGTAGATCTTGCGAACTTAGAACGGAAGGTTAATGAAATTGGGATGCGGCTTAATGTACAACTTGAGCGGAATGGTGGTTCTATGCTGAATTTCTACAATCAATCCCAACAGATATCAAACTATGAAATAAATTTGAAGAATAAGCCAGATACTGAAGTTGCAGCCATTTCAGAATCTGACTGGTCATTAAGTAAGGACACTCATTTTGGTGGAGCAGAAAATGGAAATGAGGGAAAGCTAGAGTCAACACCTTTACCAAATAAACATCCATCTAGTTCCAAGAAATCTGGTACAAGGCGTGAGGTAAGTTTCATAAACTATGCTGTGAATCTAGATATAAATCATAGTTTTTTTGTGAAAAAATTGGGTAATCAGCTTTTAACTGACATCCAAACTAAGCATTTTGAAGGAGCGCCGTAG 2493 0.3967 MTNKSAELTRVNGDVSRPSPNLQPQSGPLDPLHSRSGNGNEVFKNGPLFISSKGIGWTSWKKRWFILTQTSLVFFRSDPSVISQKGNEVNLTLGGIDLNNSGSVVVKEDKKLLIVQFPNVRDGRAFTLKAETLKDLYEWKLALENALAQAPNAANLMGQNNILRSDQTDSLDNYLDQLKDRETIKYTVIGRPILLALEEVDGTPSFLEKALRFIEEHGVKVEGILRQAADVDDVENRVREYEQGKIEFSKEEDAHVIADCVKHVLREFPSSPVPASCCKALLEASRTARASRVSNMRAAICDTFPEPNRRLLQRILLMMQTIASHKADNRMSSSAVAACMAPLLLRPLLAGDCQIENDFDVGGDGSLQLLQAAAAANHAQAIVITLLEEYDIIFGEGSASPGPDMFMDSEDSGSESEEATDDDLSYDDYYDDEQDESIQESDVDEDDDLVSEINSETGDSMVSDEYNDKDHDLSDSSSKSSEVSNDLEVDQMLSTTSLEVSLCQCEDTKSCESVTSPNNTASVDESNEPTDIIEDLSQCQTTIHKSNCPIPSSCMNKSITIPNNLPHRCRNVLGRNSARKNLSMESIDYVDEYEAEIEKLEDVQTELQNQIAEVKVNAKLHSNMETQKQALQERHLALEQNVARLQEQLLNEKSSRATLEAGLKLPPETLSDLSSVDEKTKADLDELAMIEVDLANLERKVNEIGMRLNVQLERNGGSMLNFYNQSQQISNYEINLKNKPDTEVAAISESDWSLSKDTHFGGAENGNEGKLESTPLPNKHPSSSKKSGTRREVSFINYAVNLDINHSFFVKKLGNQLLTDIQTKHFEGAP. 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01861 830 MobiDBLite consensus disorder prediction 1 37 - -
Seca8g01861 830 ProSiteProfiles PH domain profile. 41 148 IPR001849 -
Seca8g01861 830 SMART PH_update 42 150 IPR001849 -
Seca8g01861 830 CDD PH 44 143 - -
Seca8g01861 830 Gene3D - 31 149 IPR011993 -
Seca8g01861 830 MobiDBLite consensus disorder prediction 410 453 - -
Seca8g01861 830 Pfam PH domain 44 147 IPR001849 -
Seca8g01861 830 Gene3D Rho GTPase activation protein 173 395 IPR008936 -
Seca8g01861 830 Pfam Leucine-zipper of ternary complex factor MIP1 632 709 IPR025757 -
Seca8g01861 830 MobiDBLite consensus disorder prediction 462 477 - -
Seca8g01861 830 MobiDBLite consensus disorder prediction 756 788 - -
Seca8g01861 830 MobiDBLite consensus disorder prediction 398 487 - -
Seca8g01861 830 Coils Coil 231 251 - -
Seca8g01861 830 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 28 758 - -
Seca8g01861 830 Coils Coil 621 655 - -
Seca8g01861 830 ProSiteProfiles Rho GTPase-activating proteins domain profile. 195 394 IPR000198 GO:0007165
Seca8g01861 830 SUPERFAMILY GTPase activation domain, GAP 203 396 IPR008936 -
Seca8g01861 830 SUPERFAMILY PH domain-like 19 148 - -
Seca8g01861 830 SMART RhoGAP_3 201 391 IPR000198 GO:0007165
Seca8g01861 830 CDD RhoGAP 204 342 - -
Seca8g01861 830 Coils Coil 590 617 - -
Seca8g01861 830 Pfam RhoGAP domain 204 347 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01861 Seca-Chr8 38460695 38496087 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01861 - - psat:127118681 1003.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01861 8 38460695 38496087 Seca8g01861 8 38460695 38496087 ECH