Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01846 ATGTCTGCAGCTGGAAACCTCGGTTGCGTGGTGGTGGCGGTGGATGGCAGCGAAGAGAGCATGGACGCTCTGCGGTGGGCCTTGGACAACCTCAAGCTCCGATCACCTACATCCGATTCCTCCGCCGACGGAGGTCACTTCGTCATCTTCCACGTCCAATCCCCGCCCTCCATCGCCACCGGTCTTAATCCCGGTGCCATCCCTTTCGGTGGCCCCAGTGACCTCGAAGTGCCTGCGTTCGCTGCAGCCATCGAAGCTCACCAGAAGCGGATCACCGACACCATACTTGATCACGCCTTGGGAATTTGCTCCCAATTCAATTTGACACAGGCGAAGGTCAAGACCCATGTTGTTGTTGGAGATCCAAAGGAGAAGATTTGTGAAGCTGTACAGGATTTGCATGCTGATGTGCTTGTGATGGGGTCTCGTGCATTTGGCCCTATTAAGAGGATGTTCCTGGGAAGTGTTAGCAACTACTGTGCCCACCATGCTCAATGTCCAGTCATTATTATCAAGGGAAAGGACGGTGTCACTAAGAAAAACTAA 546 0.5348 MSAAGNLGCVVVAVDGSEESMDALRWALDNLKLRSPTSDSSADGGHFVIFHVQSPPSIATGLNPGAIPFGGPSDLEVPAFAAAIEAHQKRITDTILDHALGICSQFNLTQAKVKTHVVVGDPKEKICEAVQDLHADVLVMGSRAFGPIKRMFLGSVSNYCAHHAQCPVIIIKGKDGVTKKN. 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01846 181 Gene3D HUPs 2 181 IPR014729 -
Seca8g01846 181 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 10 172 - -
Seca8g01846 181 PRINTS Universal stress protein signature 150 172 IPR006015 -
Seca8g01846 181 PRINTS Universal stress protein signature 132 144 IPR006015 -
Seca8g01846 181 PRINTS Universal stress protein signature 7 25 IPR006015 -
Seca8g01846 181 CDD USP_Like 10 171 - -
Seca8g01846 181 Pfam Universal stress protein family 10 172 IPR006016 -
Seca8g01846 181 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 10 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01846 Seca-Chr8 38307203 38311267 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01846 - - gmx:100805479 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01846 8 38307203 38311267 Seca8g01846 8 38307203 38311267 ECH