Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01792 ATGCCAATGTCATTCTTAGCAGTGCAATGCCACAATCTTGTCATAGCAAATGTGGCTTCTTTCGCAGATGATGAGGTTTCCTGTTCATTGTGCAGTGAGACAATGGAGCGTGATATTTTAGATATTCATAAAGGTGAAAATTGCCCTCAAAGGATTGTCACTTGTGAGTTCTGTGAGTTTCCATTGCCAGCAATTGATCTGGCTGAGCATCAGGAAGTATGTGGGAATCGAACAGAACTTTGTCACCTTTGTCACAAATATGTTAGACTTCGGGAAAGATACAATCATGAAGCAAGATGCAATGGCATCCAAGATAATGCTGTGGGATCTTCGAGGGGTGTGAGGGAAGCTGAAAGAGAGGCAGGTCCTCGGAGAAGGCAGCAGAATGACTTCTCAACTAGACGTCTTCTTTTCACAATAGCCATCACTGGTATTGCTGTTATACTTGGATCTATTTTCCTACAAAGGAAGGCAGAGCCTAGTGATGTGCATTAG 495 0.4303 MPMSFLAVQCHNLVIANVASFADDEVSCSLCSETMERDILDIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHLCHKYVRLRERYNHEARCNGIQDNAVGSSRGVREAEREAGPRRRQQNDFSTRRLLFTIAITGIAVILGSIFLQRKAEPSDVH. 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01792 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 77 IPR013083 -
Seca8g01792 164 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 24 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01792 Seca-Chr8 35872140 35876750 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01792 - - ccaj:109808130 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01792 8 35872140 35876750 Seca8g01792 8 35872140 35876750 ECH