Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01763 ATGGTTACCGGTTGGAGAAGAGCCTTTTGCACGAGCGACCCAGAATCCACAGTAGACAACAAATGCAGAAGCCATAGTCCTACTCATTCTTCCTCCGAAAGCTGTGTTAAACCAAACAACCCCTCCACACCAACACCGCAGCAGCAACAACAAAACGTACCCAAGTCAAATCTAACCTCTCCTCGCTCCCCTAATCTCAAACTCTTTCTCTTCAAGAACAGCTTCAAATCCAGAAGTAGTTGCGGAATGTGTTTGAATAGCGTGAAGACAGGGCAGGGCATGGCGATTTACACTGCAGAATGCGGCCACGCTTTTCATTTCCCCTGCATCGCTACAAACGGCACTGTCGTTTGCCCCGTCTGCAACACTACCTGGAAAGACGCACCACTCCTCCAACAAAACGACGACGTCGTTAACACCGTCCAAACCGAAACCAACAACCTCGACGCTCCACGTCACCAACCGAGCCATTCCAATTCGGTCAGGTCCTACGACGACGACGAGCCTCTCCCTTCTCCTCTCTCCGGCACTAGCCACATCGCTCCAATTCCCGAAGCCAGCGAAAACGGCGAAGAAGAAGACGAAAACGACGACGCAGGCGAGTTCCGTGGCTTTTTCGTTAATCCAAAACCGAAACTAAACGACAGTGATTCAAGGAGCGTTCGGGTGAACTTGATGCCAGAGTGTGCAGTTATATCCGTTTCTCAGAGTCACGAGACTTACGCTTTGGTTTTAAGAGTTAAAGCTCCGCCACCGCCATCGCCGCCGCATCGTTCACCGATGGATCTGGTAACAGTGCTCGATGTTGGCAGCAACATGAATAGTTCGAAGCTTCACATGCTAAAGCGCGCGATGCGTTTGGTTATCTCTTCCCTCGGCTCGGCTGACCGGCTCTGCATCGTGGCTTTCTCCGGTTCCTCCAAACGATTGTTACCGTTGCGGAGAATGACGGCTCAGGGCCAGCGCGTGGCTCGGCGCGTCGTTGACAAGCTCGTTTGCGGCGAAGGAAATAGCGTGGGGGAAGCCATGAGGAAAGCCACGAAGGTTCTAGAAGACAGGAGAGAGAGAAACCCGATCGCCAGAATCATTCTTCTATCAGAAGAGAGGGTGCAACTGCAACTGCAAGTTGATGATAACAACTCCAATCATCGGACATACTCCAGCCACGTGGCGGTTTCATCAACCCGGTTCAATCAGATTCCGGTTCATTCCTTTGGGTTCGGAAACAAAACCGGAATAACCCGCGAGCCGGTGGAGGATGATTTTGTCATTAGGGGAATTTTGAGTGTGATGGTGCAGGACTTGAGAATTCAGCTTGGCTTTTCAGCGCCAGCTGAAATCAGAGCCGTTTATTCTTGCATAGGACGGCCCATGGTTCTGAGCCCAGACTCGGCTCGGCTTGGTGACTTGTACGCTGATGAAGAAAGAGAACTGTTGGTGGAAGTTAGAGTTCCCACGTCAGCATTGGGGAGGCACCACGTGATAACAGCGAGGTGCATTTATAAAGACCCAGTGAGGCAAGAGTTAGTATGCGGTGGGGAACACGCGCTTCCAGTGACGCCACCATGGAAGAACGCGCCGCCAGCTAACAGCAAGATTGAGAGGTTGAGAAATGTGTTCATAACGAGCCGAGCCGTAGCTGAGTCCCTCAGACTTGCGGAGCATAATGAGTTTACAAGTGCTCATCATTTGCTTGCTTCGGCTCAGGCGCTTTTGGCGCGGTCTGGCTCGGCTGAGGAGTATGTGCGTGGCTTGGAAGCTGAGCTGGCAGAGCTTCATAAGCAGAAGCAGCAATGGGAAACAATGGTGCAACGGAGGGGGAGGAGGGAGATGAGGTTGGTGGATGAGAATAGTGAGGAGCTGACACCAACTTCGGCTTGGAGAGCGGCTGAGAAGCTGGCTAAGATGGCCATGATGAAGAAGTCGTTGAATAGAGTCAGTGATTTGCACGGCTTTGAAAATGCTAGGTTTTAA 1974 0.5182 MVTGWRRAFCTSDPESTVDNKCRSHSPTHSSSESCVKPNNPSTPTPQQQQQNVPKSNLTSPRSPNLKLFLFKNSFKSRSSCGMCLNSVKTGQGMAIYTAECGHAFHFPCIATNGTVVCPVCNTTWKDAPLLQQNDDVVNTVQTETNNLDAPRHQPSHSNSVRSYDDDEPLPSPLSGTSHIAPIPEASENGEEEDENDDAGEFRGFFVNPKPKLNDSDSRSVRVNLMPECAVISVSQSHETYALVLRVKAPPPPSPPHRSPMDLVTVLDVGSNMNSSKLHMLKRAMRLVISSLGSADRLCIVAFSGSSKRLLPLRRMTAQGQRVARRVVDKLVCGEGNSVGEAMRKATKVLEDRRERNPIARIILLSEERVQLQLQVDDNNSNHRTYSSHVAVSSTRFNQIPVHSFGFGNKTGITREPVEDDFVIRGILSVMVQDLRIQLGFSAPAEIRAVYSCIGRPMVLSPDSARLGDLYADEERELLVEVRVPTSALGRHHVITARCIYKDPVRQELVCGGEHALPVTPPWKNAPPANSKIERLRNVFITSRAVAESLRLAEHNEFTSAHHLLASAQALLARSGSAEEYVRGLEAELAELHKQKQQWETMVQRRGRREMRLVDENSEELTPTSAWRAAEKLAKMAMMKKSLNRVSDLHGFENARF. 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01763 657 MobiDBLite consensus disorder prediction 13 61 - -
Seca8g01763 657 Pfam von Willebrand factor type A domain 263 366 IPR002035 -
Seca8g01763 657 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 163 IPR013083 -
Seca8g01763 657 ProSiteProfiles Zinc finger RING-type profile. 81 122 IPR001841 -
Seca8g01763 657 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 79 652 - -
Seca8g01763 657 MobiDBLite consensus disorder prediction 12 61 - -
Seca8g01763 657 Pfam RING-like zinc finger 81 110 IPR001841 -
Seca8g01763 657 Coils Coil 582 602 - -
Seca8g01763 657 SMART VWA_4 260 436 IPR002035 -
Seca8g01763 657 Gene3D von Willebrand factor, type A domain 262 422 IPR036465 -
Seca8g01763 657 ProSiteProfiles VWFA domain profile. 262 409 IPR002035 -
Seca8g01763 657 SUPERFAMILY RING/U-box 75 129 - -
Seca8g01763 657 SMART ring_2 81 121 IPR001841 -
Seca8g01763 657 MobiDBLite consensus disorder prediction 145 209 - -
Seca8g01763 657 SUPERFAMILY vWA-like 260 410 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01763 Seca-Chr8 35164595 35166826 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01763 - - gmx:100819417 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01763 8 35164595 35166826 Seca8g01763 8 35164595 35166826 ECH