Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01265 ATGAATATGTTGAATCCTCTATCAAATGAACATTCTCATTTGTCACCAAGTATACAGATTAAAGATTGCTCCAAGTATGGAACATTTATTAGCAAGAATGTTGGGCCCAAGAAGAAAGTTCATGAACTACCAAACAAAGAAGCAGCATTACAGGATGGTGACCTTGTTTCTTTTGGTACCGGTAGTGCTACCTACAAGTTTTGCCACATCCCGCTGATTTTTTTCATCTGTTCCTTGAATGAAGTGGATCGATCTGTTGAAGAGAAAATTTCATCAATTGGTGCTAGTGTTACTCATACCTTAAGTGAAGAGTGCACACATGTGCTGGTAGATCAACTCATGCCCTTGAAGAAGGATCTCATTGATGCCGTTGTGGCCAAAAAATATTGCGTTCTCAAAACTTGGCTTGAGTTTTTTGCAGAAAAGAACATTAGCACTGAAATTCCTAGCTGTCATTCATGTATTCCAACAGTATCAGTGGAAGGAGCATCTATCGAAGTTGTTGACCCCAAAACTCGTGAAACCTGCTTGAAAGGATACACTTTTGTGTTGGCATCTGTGCATTTGTATAAATTCGGGGATCAGCTAAAGTCTTTATTGGAAGTAGCTGGTGCTAAAATTATTTCTTTTGAAGAATTTTCTTCAAATAGTCAAGGTTCAGATTATGGAGATGATAATCGTGTGGTTTGTGTCATCCCAGGAGAACCAGCATGCAAGTCTGATCTCTTCAATACATTAAGTTCAATGCTTAGAGTGAATGAGATGGATGTAATATTTGGTGCCTTAAGTGGACAGCTAGATCTGTCTATTTTTAAATCACCATGTGTACTTGTTTCATCATCATGCTCTACCGCCTCTACGGATGAAACTGTTGTAGCTGATTCAGATACTGAAGTTGAAACAGCCACATCAGCCCATGCAAGTGAGGCATTCTGTGACGGCAATAGTATAAAATATGTAAAGACAGAGGAATTAGATGATGATTCTGGCGTTTTGGATAAGAGAAAACATGAGAGTTTGGAGGCATCCTTAGATGATGTTTCAACCAGATTGCATGAGGTAAAATGTGCAAAAGCAGAAACATCCTTGGATGGTGCTTCTGTCAGATCAGAAACACATGCTACCAGCTTCAAGGATGGTAGTGGTGGTATCAAAGTAAAGAAAGACAAGGTTGAGGATTATGAAAGTGGATATTCAGATATTGTTTACAGCCAAGATTTAGTTGTTCGAGATACAAACATACTCACTAACATAAGTACTGCAACAAACAGCAGCGCTCCAAACTTTAAACGCTTTAGAAAGGCACAAAGTCAATCTGGTAATAGTTTCGACAATCTTGTTCCATTTGCAAAATATCCATACAAGGATTCTGGCTATGGGAATGATGAGAAGGTTGAGTTTGTGAAGGAGGAGAAAAGGCGAAAGCAAATGGAAGCTGTGGCTGATGACCTATTTAATAATAAGCAGGCAAGAAAACGAGGCACAGCTGGTTCTATTCGTGGGATGCTTATTTCATGA 1518 0.39 MNMLNPLSNEHSHLSPSIQIKDCSKYGTFISKNVGPKKKVHELPNKEAALQDGDLVSFGTGSATYKFCHIPLIFFICSLNEVDRSVEEKISSIGASVTHTLSEECTHVLVDQLMPLKKDLIDAVVAKKYCVLKTWLEFFAEKNISTEIPSCHSCIPTVSVEGASIEVVDPKTRETCLKGYTFVLASVHLYKFGDQLKSLLEVAGAKIISFEEFSSNSQGSDYGDDNRVVCVIPGEPACKSDLFNTLSSMLRVNEMDVIFGALSGQLDLSIFKSPCVLVSSSCSTASTDETVVADSDTEVETATSAHASEAFCDGNSIKYVKTEELDDDSGVLDKRKHESLEASLDDVSTRLHEVKCAKAETSLDGASVRSETHATSFKDGSGGIKVKKDKVEDYESGYSDIVYSQDLVVRDTNILTNISTATNSSAPNFKRFRKAQSQSGNSFDNLVPFAKYPYKDSGYGNDEKVEFVKEEKRRKQMEAVADDLFNNKQARKRGTAGSIRGMLIS. 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01265 505 Gene3D BRCT domain 61 144 IPR036420 -
Seca8g01265 505 PANTHER NIBRIN-RELATED 353 490 IPR040227 GO:0006302|GO:0007095|GO:0030870
Seca8g01265 505 SUPERFAMILY BRCT domain 74 137 IPR036420 -
Seca8g01265 505 CDD BRCT 72 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01265 Seca-Chr8 19697599 19706358 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01265 K10867 - gmx:100789459 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01265 8 19697599 19706358 Seca8g01265 8 19697599 19706358 ECH