Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01211 ATGGCAAAGGCACACACAATTGGAATAGCCATGGACTTTTCTCCTACCAGCAAATTTGCCCTTAGATGGACTGTTGATAATCTCATCAACAAAGGTGATCATCTCATCATGATCAATGTTCAGCCTCCTAAAGCTGATCACACCAGAAAGGAGCTTTTTGAGGACACTGGTTCACCTTTGGTGCCTCTGGAGGAATTGAAAGAGATAAACTTTACAAAGCAATATGGGATTACTAGGGATCCTGAAGTCATAGATATCCTTGACACTGCCTCCAGGACCAAAGGGGCAAAGGTAGTGGCAAAGGTGTATTGGGGAGATCCAAGGGAGAAATTGTGCAGGGCTGTGGAAGATCTTCACCTGGACTCTTTGGTTGTTGGAAGCAGGGGTTTAGGTCCCATTAAAAGGTATAATCACTAA 417 0.4412 MAKAHTIGIAMDFSPTSKFALRWTVDNLINKGDHLIMINVQPPKADHTRKELFEDTGSPLVPLEELKEINFTKQYGITRDPEVIDILDTASRTKGAKVVAKVYWGDPREKLCRAVEDLHLDSLVVGSRGLGPIKRYNH. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01211 138 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 136 - -
Seca8g01211 138 Pfam Universal stress protein family 5 135 IPR006016 -
Seca8g01211 138 CDD USP_Like 6 135 - -
Seca8g01211 138 PANTHER IMP2'P 1 136 - -
Seca8g01211 138 Gene3D HUPs 2 136 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01211 Seca-Chr8 18728000 18729659 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01211 - - gmx:100500682 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01211 8 18728000 18729659 Seca8g01211 8 18728000 18729659 ECH