Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01164 ATGTGTGATGCTTACACTGCTGCTGGAGAGCCTATTCCCACAAACAAGAGACATGCTGCTGCAAAGATATTCAGCCATCCTGATGTTGTTGCTGAAGAACCCTGGTATGGTATTGAGCAGGAATACACCTTGTTGCAGAAACATATCCAGTGGCCTCTTGGATGGCCTGTTGGTGGTTTCCCTGGTCCTCAGGGTCCATACTATTGTGGTACTGGTGCTGACAAGGCTTTTGGGCGTGAAATTGTTGACTCACATTACAAAGCCTGTCTTTTTGCTGGCATTAACATCAGTGGAATTAATGGGGAAGTGATGCCAGGCCAGTGGGAATTCCAAGTTGGTCCATCTGTTGGCATTTCTGCTGGTGATGAGATATGGGTTGCTCGCTACATTTTGGAGAGGATCACAGAGATTGCTGGGGTGGTCCTTTCCTTAGACCCTAAGCCAATTCAGTTATTAATCCAGGGTGATTGGAATGGTGCTGGTGCTCACACAAATTACAGCACCAAGTCTATGAGAAATGATGGTGGCTATGAAGTCATCAAAAATGCAATTGCCAAGTTAGAGAAGAGGCACAAGGAGCACATTTCTGCTTATGGAGAAGGCAATGAGCGTCGTTTAACAGGACGACATGAGACTGCTGATATTAACACCTTCAAATGGGGTGTTGCAAACCGTGGAGCTTCTGTTAGGGTAGGGAGGGAAACTGAGAAAGAAGGGAAGGGATATTTTGAGGACAGGAGGCCTGCATCTAACATGGATCCATATGTTGTTACTTCCATGATTGCAGAGACAACCATTCTCTGGAAACCATGA 813 0.46 MCDAYTAAGEPIPTNKRHAAAKIFSHPDVVAEEPWYGIEQEYTLLQKHIQWPLGWPVGGFPGPQGPYYCGTGADKAFGREIVDSHYKACLFAGINISGINGEVMPGQWEFQVGPSVGISAGDEIWVARYILERITEIAGVVLSLDPKPIQLLIQGDWNGAGAHTNYSTKSMRNDGGYEVIKNAIAKLEKRHKEHISAYGEGNERRLTGRHETADINTFKWGVANRGASVRVGRETEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP. 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01164 270 PANTHER GLUTAMINE SYNTHETASE 1 268 - -
Seca8g01164 270 Pfam Glutamine synthetase, catalytic domain 79 260 IPR008146 GO:0004356|GO:0006807
Seca8g01164 270 SUPERFAMILY Glutamine synthetase/guanido kinase 13 266 IPR014746 GO:0003824
Seca8g01164 270 ProSiteProfiles Glutamine synthetase (GS) catalytic domain profile. 16 270 IPR008146 GO:0004356|GO:0006807
Seca8g01164 270 FunFam Glutamine synthetase 14 270 - -
Seca8g01164 270 Gene3D Glutamine synthetase/guanido kinase, catalytic domain 14 214 - -
Seca8g01164 270 Gene3D Glutamine synthetase/guanido kinase, catalytic domain 215 270 - -
Seca8g01164 270 SMART Gln_synt_C_2 13 265 IPR008146 GO:0004356|GO:0006807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01164 Seca-Chr8 17390582 17395365 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01164 K01915 - rcu:8279712 520.39