Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01163 ATGGTAACTTTGGTGTCCCAAGAAAACGTTGTGACATTGGTTTCTCGCACTGGCAGAGAGTTGCAGCGCTACAGAAAAGGTCGTCGTCAAGTTGTGGGATGCATACCATATAGATATAAAATTAGTGACCTAAATTCCTTAGAGGCACCTGAAGAATTAGAAGTTTTAGTTATTACTTCTCAGAAAGGCAAAGGGATGCTATTTCCTAAGGGAGGTTGGGAATTAGATGAATCTAAAAAGGAGGCAGCTTTGAGAGAAACTATAGAGGAAGCAGGGGTACAAGGCATTGTTGGGGTGAGAGGCTACACTTTGTTAATGCAGGGTAAATTGGGTAAATGGAGCTTCAAAAGCAAAACCCATAATACTTTATATGAAGGGTACATGTTCCCTCTACTTGTTCAAGAGCAATTTGAGATTTGGCCAGAACAGAATGTTCGTCAAAGAATTTGGATGAGTGTTTCTGAAGCAAAGGAAGTTTGTCAACACTGGTGGATGAAAGAAGCACTAGAGAGACTTGTAAATCGACTTACGGCTCAGAAACAACAAGTAGTGGGTTCTGTGCAGTGCATAGGAGATGGCAAATCTGACTTGTAA 594 0.4108 MVTLVSQENVVTLVSRTGRELQRYRKGRRQVVGCIPYRYKISDLNSLEAPEELEVLVITSQKGKGMLFPKGGWELDESKKEAALRETIEEAGVQGIVGVRGYTLLMQGKLGKWSFKSKTHNTLYEGYMFPLLVQEQFEIWPEQNVRQRIWMSVSEAKEVCQHWWMKEALERLVNRLTAQKQQVVGSVQCIGDGKSDL. 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01163 197 CDD Nudix_Hydrolase_9 30 166 IPR047198 GO:0016462
Seca8g01163 197 FunFam Nudix hydrolase 17, mitochondrial 14 175 - -
Seca8g01163 197 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 14 178 - -
Seca8g01163 197 ProSiteProfiles Nudix hydrolase domain profile. 27 173 IPR000086 -
Seca8g01163 197 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 176 - -
Seca8g01163 197 SUPERFAMILY Nudix 23 176 IPR015797 -
Seca8g01163 197 Pfam NUDIX domain 54 171 IPR000086 -
Seca8g01163 197 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01163 Seca-Chr8 17345080 17346625 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01163 K07766 - gmx:100305863 325.094