Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01162 ATGAACCTCTCCTTCTCAATCTTATTCTTGAGTATGTTTCTATTTTTTCATTCTCTCTCAGCTTCATCTAGCACAAGCCTCTATCTTTATGGTGGTTGCACTCAGCAAAGGTACACACCTAACTCGCCCTATGAGTCAAACCTTGACTCACTCCTCACCTCGCTGGTCAACTCAGCCACGTACTCTTCCTACAACAACTTCACCGTGCTGGGGTCCACCCAACAAGACGTTGTGTACGGCCTCTACCAGTGCCGCGGCGACCTCGCCATGCCGGACTGCGCCGCCTGCGTCGCACGCGCCGTCACACGCGCCGGTGACATGTGCCGGGAGTCCTGCGGCGGTGCGGTGCAGTTGGATGGTTGTTACGTGAAGTACGACAACGCCACGTTCCTTGGCGTGGAGGATAAGGCGGTTGTGCTTAAAAAGTGTGGGCCTTCCGTGGGCTATAACCCGGAGGCCATGGGCTCTAGGGATGCTGTGCTTGCTGGGCTCGCGGGCTCTGGTGGGCCTTTTAGGATTGGCGGGTCTGGTGGTGTGCGGGGTTTGGCTCAGTGTACCGGTGACTTGAGCTTTGGTGAGTGTCAGGATTGTGTCTCTGAGGCTATCTCGCGGCTGAAGAGTGATTGCGGTACGGCGGATTACGGTGACATGTTCTTGGGGAAGTGTTACGCGAGGTATTCAACCGGTGGGGCCCATGATACCTCCAAGGCCCACGGTAAATCAGGTAATGAAGGTCAAAAGACATTTGCTATAATCATTGGATCATTAGCAGGAGTTGCTATACTCATTACTTTCCTTGCTTTCTTGAGCAAGATTTGTGGACACCGTGGTAAATGA 837 0.5352 MNLSFSILFLSMFLFFHSLSASSSTSLYLYGGCTQQRYTPNSPYESNLDSLLTSLVNSATYSSYNNFTVLGSTQQDVVYGLYQCRGDLAMPDCAACVARAVTRAGDMCRESCGGAVQLDGCYVKYDNATFLGVEDKAVVLKKCGPSVGYNPEAMGSRDAVLAGLAGSGGPFRIGGSGGVRGLAQCTGDLSFGECQDCVSEAISRLKSDCGTADYGDMFLGKCYARYSTGGAHDTSKAHGKSGNEGQKTFAIIIGSLAGVAILITFLAFLSKICGHRGK. 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01162 278 Gene3D - 25 130 IPR038408 -
Seca8g01162 278 Gene3D - 157 229 IPR038408 -
Seca8g01162 278 ProSiteProfiles Gnk2-homologous domain profile. 26 130 IPR002902 -
Seca8g01162 278 Pfam Salt stress response/antifungal 33 127 IPR002902 -
Seca8g01162 278 Pfam Salt stress response/antifungal 177 228 IPR002902 -
Seca8g01162 278 FunFam cysteine-rich repeat secretory protein 3 25 130 - -
Seca8g01162 278 ProSiteProfiles Gnk2-homologous domain profile. 131 231 IPR002902 -
Seca8g01162 278 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 4 273 - -
Seca8g01162 278 FunFam Cysteine-rich repeat secretory protein 60 151 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01162 Seca-Chr8 17336003 17338381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g01162 18 278 Receptor kinase-like Gene Family AT4G23280 26.573 5.06e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01162 - - gmx:100817574 445.277