Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01083 ATGGGAAACACCATTGGAAGAAGCCAAAAAGCCAAGGTGATGAAAATAGATGGCGAGACCTTTAAGGTAAAGATTCCGGCCACAGCAAACGACGTCGTTAAGGACTATCCCGGTCACGTTCTCCTTGATTCCCAAGCGGTTAAACATTTCGGGCTTCGGGCCAAGCCACTTGAGCCTCACCAAGAGCTCAAGCCCAAGAAAATTTACTTCCTCCTTGAGTTACCGAAGATTCAGCCCGAAGAGGAAAAAACGGCGTTGCCTAGGAGGGTGCGATCCAGTGGAATTCGGGGTATGAACGCTAAGGATAGGCTCGAGCTTTTGATGCTATCAAAACGCTCCGTTTCGGATCTCACCCTTGTTAAGACACCACCGAATCTGGGCATTGATGATGGGCCCATGAGGGTGAAGATGAGGCTACCCAAGGCCCAGTTAGAAAAATTAATGGAAGAGAGCAACGACGGCTCTGAGGTGGCGGAGAAGATCATGAGTTTGTATATTGGAGGTAATGCCGGCGAGGGTGACGGCGCTGTTGCGGCGGAAGACGGTGGCGCGAGGATCGTACGCCATCACAATCAAAAGCCTCGTGGGAAACGAGTGAGTTTTAGCCCAATGGAATATGAAGAAAGTCATATAGAAGCAGCTCCTCAATAG 651 0.5008 MGNTIGRSQKAKVMKIDGETFKVKIPATANDVVKDYPGHVLLDSQAVKHFGLRAKPLEPHQELKPKKIYFLLELPKIQPEEEKTALPRRVRSSGIRGMNAKDRLELLMLSKRSVSDLTLVKTPPNLGIDDGPMRVKMRLPKAQLEKLMEESNDGSEVAEKIMSLYIGGNAGEGDGAVAAEDGGARIVRHHNQKPRGKRVSFSPMEYEESHIEAAPQ. 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01083 216 Pfam PADRE domain 1 105 IPR025322 -
Seca8g01083 216 MobiDBLite consensus disorder prediction 190 216 - -
Seca8g01083 216 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01083 Seca-Chr8 15624841 15628086 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01083 - - vra:106763161 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01083 8 15624841 15628086 Seca8g01083 8 15624841 15628086 ECH
Seca8g01083 8 15624841 15628086 Seca6g02304 6 84514297 84514971 ECH
Seca6g02304 6 84514297 84514971 Seca8g01083 8 15624841 15628086 ECH
Seca8g01083 8 15624841 15628086 Seca6g02304 6 84514297 84514971 PCT