Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g01079 ATGGCGCCTCCGATTCTTTCCTTGGCTCTTCCCTCAGAGACCGGTCGTGTTCTCAGCATTCAATCTCACACCGTTCAGGGTCATGTTGGGAATAAATCAGCTGTCTTCCCTCTGCAAATTTTGGGCTATGATGTGGATCCAATTAATTCTGTGCAGTTTTCCAATTACATAGGCAAGCTTGCTTCTTCTATTCCTTCAGACTATGCAGGGTACCCAACTTTCAAAGGTCAGGTTTTGAATGGACAGCAACTCTGGGAGCTAATAGAAGGCCTTGAAGCTAATGATTTACTCTACTACACTCACTTATTAACTGGTTATATTGGTTCAGTTTCTTTTCTCAGTGCTGTGTTGGAGGTTGTCAGCAAGCTTCGCTCAATTAACCCTGAGCTTACATATGTATGTGATCCAGTGTTGGGTGATGAAGGAAAGTTTTATGTTCCACAAGAGCTGGTATCAGTATACCGTGAGAGGGTTGTTCCAATGGCTTCAATGTTGACTCCCAACCAGTTTGAAGCAGAACTCTTGACAGGGTCTAGGATTCAGTCTGAAGGAGATGGTAGAGAAGCTTGTAACTTACTTCATGCAGCTGGACCTTCAAAGGTTGTAATTACAAGTATAAATATAGATGGGATTCTTCTCCTCATTGGCAGCTATCAAAAGGAAAAGGGACATCCCCCCAAACAATTTAAGATCGTGATTCCCAAAATACCAGCTTATTTTGCGGGAACAGGAGATCTAATGACTGCACTTCTTCTTGGTTGGAGCAAGAAATACCCGGACAACCTTGAGAAGGCTGCAGAACTTGCAGTATCAAGCTTGCAGGCACTTTTGCAAAGGACACTGAATGACTATAGAAGTGCCGGGCATGATCCTCAGTCAACCACTTTAGAAATCAGATTAATTCAAAGCCAGAATGATATTCGCAACCCACAAGTCAAATTTAAAGCTGAAATATACATCTAA 963 0.4247 MAPPILSLALPSETGRVLSIQSHTVQGHVGNKSAVFPLQILGYDVDPINSVQFSNYIGKLASSIPSDYAGYPTFKGQVLNGQQLWELIEGLEANDLLYYTHLLTGYIGSVSFLSAVLEVVSKLRSINPELTYVCDPVLGDEGKFYVPQELVSVYRERVVPMASMLTPNQFEAELLTGSRIQSEGDGREACNLLHAAGPSKVVITSINIDGILLLIGSYQKEKGHPPKQFKIVIPKIPAYFAGTGDLMTALLLGWSKKYPDNLEKAAELAVSSLQALLQRTLNDYRSAGHDPQSTTLEIRLIQSQNDIRNPQVKFKAEIYI. 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g01079 320 PANTHER PYRIDOXAL KINASE 7 317 IPR004625 GO:0008478|GO:0009443
Seca8g01079 320 SUPERFAMILY Ribokinase-like 15 317 IPR029056 -
Seca8g01079 320 CDD pyridoxal_pyridoxamine_kinase 16 281 IPR004625 GO:0008478|GO:0009443
Seca8g01079 320 Gene3D - 12 319 IPR029056 -
Seca8g01079 320 Pfam Phosphomethylpyrimidine kinase 104 210 IPR013749 -
Seca8g01079 320 NCBIfam pyridoxal kinase 16 317 IPR004625 GO:0008478|GO:0009443
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g01079 Seca-Chr8 15580065 15585273 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g01079 K00868 - jre:108988106 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g01079 8 15580065 15585273 Seca8g01079 8 15580065 15585273 ECH