Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00855 ATGCTTCTCAAAGCTGCTATTGCTGCTTCTTCTTCTTCGTCCCTTTCTCTCTTCAACAACGCCAACGTTGAGCGTTTACATTCGATTCCCTTTCGTCAAAATGGGACTGGATTGGTGGTTTGCGCCACCAAAGGCTCCAATAACAACCGTGCCCTAACTGGTGTGTTGTTTGAACCCTTCGAAGAAGTGAAGAAGGAGCTCGATCTTGTTCCCACCGTTCCACAAGCCTCTCTCGCTCGCCAAAAATACCACGACGACTCTGAAGCTGCCGTTAACGAACAAATCAATGTGGAGTACAATGTCTCGTACGTTTACCACGCAATGTTTGCCTATTTCGATAGGGACAATGTTGCGCTCAGGGGTCTTGCCAAGTTTTTTAAGAAATCAAGTGAAGAGGAAAGAGAGCATGCTGAGAAATTGATGGAATATCAGAACAAGCGGGGTGGAAAAGTGAAGCTGCAGTCTATAGTTATGCCCCTTTCTGAGTTTGACCATGCGGATAAGGGAGATGCTCTACACGCAATGGAACTTGCTCTTTCATTGGAGAAGCTAACGAATGAAAAGCTCCTTAATTTGCACAATGTTGCCTCAAAGACTGGTGATGTGCAGTTGGCAGACTTTGTGGAAAGTGAATTTTTGGGTGAACAGGTGGAAGCCATTAAAAAGATCTCCGAGTATGTTGCTCAGCTCAGAAGAGTTGGCAAAGGACATGGTGTCTGGCACTTTGATCAGATGTTGCTTCATGAGGAAGAAGGAGCTGCAGCTTGA 768 0.457 MLLKAAIAASSSSSLSLFNNANVERLHSIPFRQNGTGLVVCATKGSNNNRALTGVLFEPFEEVKKELDLVPTVPQASLARQKYHDDSEAAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKKSSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSEFDHADKGDALHAMELALSLEKLTNEKLLNLHNVASKTGDVQLADFVESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHEEEGAAA. 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00855 255 FunFam Ferritin 50 250 - -
Seca8g00855 255 ProSiteProfiles Ferritin-like diiron domain profile. 81 234 IPR009040 -
Seca8g00855 255 CDD Euk_Ferritin 84 244 - -
Seca8g00855 255 ProSitePatterns Ferritin iron-binding regions signature 2. 201 221 IPR014034 -
Seca8g00855 255 Pfam Ferritin-like domain 89 233 IPR008331 GO:0008199
Seca8g00855 255 SUPERFAMILY Ferritin-like 75 248 IPR009078 -
Seca8g00855 255 Gene3D - 49 251 IPR012347 -
Seca8g00855 255 PANTHER FERRITIN 60 248 IPR001519 GO:0006826|GO:0006879|GO:0008199
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00855 Seca-Chr8 11433641 11436693 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00855 K00522 - gmx:100787160 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00855 8 11433641 11436693 Seca8g00855 8 11433641 11436693 ECH
Seca8g00855 8 11433641 11436693 Seca8g00855 8 11433641 11436693 PCT