Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00839 ATGTCCCATATGCAATCCTCTCTTCAAAAACCAGGTGTAATTCCCATCCAAAATGTTGGATGGAACTCTCAAAGTAGGCTTTTCATCCAGAGCTTGGCGATTGGTGAGAAGCGCATTAATTCTCACAACAAATGGAAGCGAACACTAGTGTCATCTGCAAAAACAGCAGAAGCTATTGACACTGCCAAGTCTGAGGCTTCTTTGGATAGCTTTCCAAAAGAATCTTTGGAGAAAAAACCTTTGCCAACTGCTACATTTCCTAATGGATTTGAGACTTTGGTATTAGAGGTATGCGATGAGACTCAAATTGCTGAACTGAAAGTAAAGGTTGGAGAGTTTGAGATGCATATGAAGCGTAACATTGGAGTAGCAAAAGCTCCTATGTCCAACATTTCACCAATTACTCCACCACCTGTTCCTACTAAACCTATGGTTGAAGCAGCGCCTTCTGCCCCGCCACCATCACAACCAAAATCATCTCCAGAAAAGACTAATCCATTTGTAAATGTTTCCCAAGGGAAGTCATCCAAGTTGGCAGCATTGGATGCTTCTGGTACCAATAACTATGTTGTAGTACCATCTCCTACGGTTGGTTCATTCCGAAGAGGTAGAACAATCAAAGGGAAGAAGCAACCTCCTATGTGTAAAGAGGGTGATATAATCAAAGAAGGGCAAGTTATAGGGTATTTGGATCAGTTTGGCACTTCACTTCCCGTTAAGTCAGATGTGGCTGGAGAAGTTTTGAAGCTACTCTTTCAGGATGGAGAGGCTGTTGGTTATGGAGACCCTCTTATTGCTGTCTTACCATCATTCCATAATATCAAGTGA 828 0.4215 MSHMQSSLQKPGVIPIQNVGWNSQSRLFIQSLAIGEKRINSHNKWKRTLVSSAKTAEAIDTAKSEASLDSFPKESLEKKPLPTATFPNGFETLVLEVCDETQIAELKVKVGEFEMHMKRNIGVAKAPMSNISPITPPPVPTKPMVEAAPSAPPPSQPKSSPEKTNPFVNVSQGKSSKLAALDASGTNNYVVVPSPTVGSFRRGRTIKGKKQPPMCKEGDIIKEGQVIGYLDQFGTSLPVKSDVAGEVLKLLFQDGEAVGYGDPLIAVLPSFHNIK. 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00839 275 MobiDBLite consensus disorder prediction 133 160 - -
Seca8g00839 275 SUPERFAMILY Single hybrid motif 184 266 IPR011053 -
Seca8g00839 275 PANTHER IS A MEMBER OF THE PF|00364 BIOTIN-REQUIRING ENZYMES FAMILY-RELATED 30 275 - -
Seca8g00839 275 FunFam Biotin/lipoyl attachment domain-containing protein 188 267 - -
Seca8g00839 275 Gene3D - 188 267 - -
Seca8g00839 275 CDD biotinyl_domain 191 267 - -
Seca8g00839 275 MobiDBLite consensus disorder prediction 133 170 - -
Seca8g00839 275 Pfam Biotin-requiring enzyme 206 266 IPR000089 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00839 Seca-Chr8 11115926 11121092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g00839 94 269 Acyl Lipid Metabolism Gene Families AT5G15530 22.652 1.15e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00839 - - gmx:100792471 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00839 8 11115926 11121092 Seca8g00839 8 11115926 11121092 ECH