Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g00837 ATGTTTGGACCAGTGAGTGGGAAGGATGGGTGGAAAGATTTGACTTTCGTGTATGATAAAGTTCGAATTCGAGATGAAGCTATCTGTTCAAATTTCCTCCACATTTTTGCAAGTGAGGTAGGTTGCAGGATGCTACAAATGTCTTGTGAGGAACATGATAAAGTAGCTGCTAAGAGCCAATTTGTCACTCACACTATAGGCAGGACATTGGCTGAAATGGATATTAAGTCCTCACCTATCGATACAGAGGGCTTTCAGACACTTGTTCAATTGAAGGACACCACCATGAGAGATAGTTTTGATCTGTATAGTGGATTATTCATATATAACAGATTCGCTAGACAAGAGCTTGAAAACCTTGAACATGCCATGCACAAAGTCAAAGAGATGCTGGTTCAAAGGACGAATGAGGAGCTGGGTCCAGAAAAGACTGAATGTTGA 441 0.4104 MFGPVSGKDGWKDLTFVYDKVRIRDEAICSNFLHIFASEVGCRMLQMSCEEHDKVAAKSQFVTHTIGRTLAEMDIKSSPIDTEGFQTLVQLKDTTMRDSFDLYSGLFIYNRFARQELENLEHAMHKVKEMLVQRTNEELGPEKTEC. 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g00837 146 Coils Coil 110 137 - -
Seca8g00837 146 PANTHER AROGENATE DEHYDROGENASE-RELATED 1 139 IPR045011 GO:0006571|GO:0033730
Seca8g00837 146 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 48 138 IPR008927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g00837 Seca-Chr8 11112493 11115204 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g00837 K15227 - gmx:100787362 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g00837 8 11112493 11115204 Seca8g00837 8 11112493 11115204 ECH